RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 TP53P04637 393 aaPredicted RBP15.39■□□□□ 0.05
COL7A1-210ENST00000487017 DLX5P56178 289 aa15.39■□□□□ 0.05
COL7A1-210ENST00000487017 RPS25P62851 125 aaKnown RBP15.39■□□□□ 0.05
COL7A1-210ENST00000487017 IL20RBQ6UXL0 311 aa15.39■□□□□ 0.05
COL7A1-210ENST00000487017 LILRB4Q8NHJ6 448 aa15.39■□□□□ 0.05
COL7A1-210ENST00000487017 SPTSSAQ969W0 71 aa15.39■□□□□ 0.05
COL7A1-210ENST00000487017 CENPOQ9BU64 300 aa15.39■□□□□ 0.05
COL7A1-210ENST00000487017 HOXB9P17482 250 aaPredicted RBP15.38■□□□□ 0.05
COL7A1-210ENST00000487017 PRDX1Q06830 199 aaKnown RBP15.38■□□□□ 0.05
COL7A1-210ENST00000487017 SGPP2Q8IWX5 399 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 SLC35F3Q8IY50 421 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 KCTD12Q96CX2 325 aaKnown RBP15.38■□□□□ 0.05
COL7A1-210ENST00000487017 ELP4Q96EB1 424 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 DNTTIP1Q9H147 329 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 C17orf113A0A1B0GUU1 675 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 CACNG3O60359 315 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 AIFM1O95831 613 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 SMIM18P0DKX4 95 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 RPL22L1Q6P5R6 122 aaKnown RBP15.38■□□□□ 0.05
COL7A1-210ENST00000487017 SIMC1Q8NDZ2 872 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.38■□□□□ 0.05
COL7A1-210ENST00000487017 SOCS7O14512 581 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 FURINP09958 794 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 RAB40ALP0C0E4 278 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 PRKACBP22694 351 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 TMEM244Q5VVB8 128 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 RAB40AQ8WXH6 277 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 ADAM12O43184 909 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 ADARB1P78563 741 aaKnown RBP15.38■□□□□ 0.05
COL7A1-210ENST00000487017 ILKQ13418 452 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 DPY19L4Q7Z388 723 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 RNF113BQ8IZP6 322 aaKnown RBP15.38■□□□□ 0.05
COL7A1-210ENST00000487017 KLHDC9Q8NEP7 349 aa15.38■□□□□ 0.05
COL7A1-210ENST00000487017 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 TNFSF12O43508 249 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 ZNF217O75362 1048 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 TIMP1P01033 207 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 P04436 131 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 SERPINA5P05154 406 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 CLDN22Q8N7P3 220 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 RCBTB1Q8NDN9 531 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 MKRN2Q9H000 416 aaKnown RBP15.37■□□□□ 0.05
COL7A1-210ENST00000487017 CBLCQ9ULV8 474 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 GJE1A6NN92 205 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 C1orf196B1AJZ1 125 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 FTCDNL1E5RQL4 147 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 SLC1A3P43003 542 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 AKR1C2P52895 323 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 CHRNEQ04844 493 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 SYT6Q5T7P8 510 aaPredicted RBP15.37■□□□□ 0.05
COL7A1-210ENST00000487017 Q6ZSR6 202 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 ZNF765Q7L2R6 523 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 TRAPPC6BQ86SZ2 158 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 FOXRED1Q96CU9 486 aaPredicted RBP15.37■□□□□ 0.05
COL7A1-210ENST00000487017 ZNF582Q96NG8 517 aaPredicted RBP15.37■□□□□ 0.05
COL7A1-210ENST00000487017 MAST2Q6P0Q8 1798 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 H3BML4 177 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 TAPBPO15533 448 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 FZD7O75084 574 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 AKR1C8PQ5T2L2 129 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 WBP2NLQ6ICG8 309 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 TMEM184AQ6ZMB5 413 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 Q6ZNX1 250 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 SLCO4C1Q6ZQN7 724 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 C12orf45Q8N5I9 185 aaPredicted RBP15.37■□□□□ 0.05
COL7A1-210ENST00000487017 IL17RCQ8NAC3 791 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 TMEM185AQ8NFB2 350 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 TOMM40LQ969M1 308 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 ST6GALNAC5Q9BVH7 336 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 RCE1Q9Y256 329 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 CITO14578 2027 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 SSTR2P30874 369 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 LTBQ06643 244 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 BEST4Q8NFU0 473 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 MYLIPQ8WY64 445 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 RRNAD1Q96FB5 475 aaKnown RBP15.37■□□□□ 0.05
COL7A1-210ENST00000487017 TUBB1Q9H4B7 451 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 ZNF160Q9HCG1 818 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 TXNL4BQ9NX01 149 aaKnown RBP15.37■□□□□ 0.05
COL7A1-210ENST00000487017 TAS2R16Q9NYV7 291 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 HS3ST2Q9Y278 367 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 MMP2P08253 660 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 HBQ1P09105 142 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 TPT1P13693 172 aaKnown RBP15.37■□□□□ 0.05
COL7A1-210ENST00000487017 CLDN2P57739 230 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 MFSD9Q8NBP5 474 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 NPRL2Q8WTW4 380 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 GIMAP1Q8WWP7 306 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 HHLA2Q9UM44 414 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 ZNF281Q9Y2X9 895 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 PLCH1Q4KWH8 1693 aa15.37■□□□□ 0.05
COL7A1-210ENST00000487017 KIR2DS5A0A0G2JLQ3 304 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 A0A0G2JNG1 304 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 PRSS38A1L453 326 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 PRAMEF26H0Y7S4 382 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 KIR2DS3K7RE56 304 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 GAPDHSO14556 408 aaPredicted RBP15.36■□□□□ 0.05
COL7A1-210ENST00000487017 PIGAP37287 484 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 OPRD1P41143 372 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 TAS2R19P59542 299 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms