RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 OR10Q1Q8NGQ4 319 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 BCAS4Q8TDM0 211 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 TMEM234Q8WY98 164 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 REXO5Q96IC2 774 aaKnown RBP10.68□□□□□ -0.7
HPS4-214ENST00000485842 MRGPRX4Q96LA9 322 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 GPATCH1Q9BRR8 931 aaKnown RBP10.68□□□□□ -0.7
HPS4-214ENST00000485842 TTYH2Q9BSA4 534 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 GMPR2Q9P2T1 348 aaKnown RBP10.68□□□□□ -0.7
HPS4-214ENST00000485842 STOML1Q9UBI4 398 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 SLC13A4Q9UKG4 626 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 CHST2Q9Y4C5 530 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 AP4B1Q9Y6B7 739 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 USP9XQ93008 2570 aaPredicted RBP10.68□□□□□ -0.7
HPS4-214ENST00000485842 NCOA6Q14686 2063 aaPredicted RBP10.67□□□□□ -0.7
HPS4-214ENST00000485842 PRORSD1PA6NEY8 169 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 M0QX08 132 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 NME4O00746 187 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 TPST1O60507 370 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 DNAJA2O60884 412 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 NTN1O95631 604 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 ADH6P28332 368 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 SHC1P29353 583 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 IDH2P48735 452 aaKnown RBP10.67□□□□□ -0.7
HPS4-214ENST00000485842 CLDN15P56746 228 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 PCBP3P57721 371 aaKnown RBP10.67□□□□□ -0.7
HPS4-214ENST00000485842 RPS3AP61247 264 aaKnown RBP10.67□□□□□ -0.7
HPS4-214ENST00000485842 RAC1P63000 192 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 HOXC5Q00444 222 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 LIPEQ05469 1076 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 DMTNQ08495 405 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 SELENBP1Q13228 472 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 BCL2A1Q16548 175 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 GLIPR1L2Q4G1C9 344 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 SLC25A53Q5H9E4 307 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 NSUN5P2Q63ZY6 315 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 FAM91A1Q658Y4 838 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 ERICH5Q6P6B1 374 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 DHRS4L2Q6PKH6 230 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 PLEKHM3Q6ZWE6 761 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 ZNF550Q7Z398 422 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 MRGPRGQ86SM5 289 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 PATL1Q86TB9 770 aaKnown RBP10.67□□□□□ -0.7
HPS4-214ENST00000485842 GGNQ86UU5 652 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 COMTD1Q86VU5 262 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 LSRQ86X29 649 aaPredicted RBP10.67□□□□□ -0.7
HPS4-214ENST00000485842 GRAMD2AQ8IUY3 354 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 LACC1Q8IV20 430 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 CCDC71Q8IV32 467 aaPredicted RBP10.67□□□□□ -0.7
HPS4-214ENST00000485842 MICU2Q8IYU8 434 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 CADM2Q8N3J6 435 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 SLC26A7Q8TE54 656 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 RND1Q92730 232 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 SDCCAG3Q96C92 435 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 ZNF583Q96ND8 569 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 HOPXQ9BPY8 73 aaPredicted RBP10.67□□□□□ -0.7
HPS4-214ENST00000485842 PINK1Q9BXM7 581 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 CTPS2Q9NRF8 586 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 ACER3Q9NUN7 267 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 PCNX1Q96RV3 2341 aa10.67□□□□□ -0.7
HPS4-214ENST00000485842 A0A0J9YW62 118 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 ELOVL7A1L3X0 281 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 A1L4Q6 167 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 ETV2O00321 342 aaPredicted RBP10.66□□□□□ -0.7
HPS4-214ENST00000485842 TNFSF11O14788 317 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 EFNA2O43921 213 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 GCM2O75603 506 aaPredicted RBP10.66□□□□□ -0.7
HPS4-214ENST00000485842 MFN2O95140 757 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 EPPINO95925 133 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 CCNA2P20248 432 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 ACAA2P42765 397 aaKnown RBP10.66□□□□□ -0.7
HPS4-214ENST00000485842 EIF1AXP47813 144 aaKnown RBP10.66□□□□□ -0.7
HPS4-214ENST00000485842 GSK3BP49841 420 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 RGS8P57771 180 aaPredicted RBP10.66□□□□□ -0.7
HPS4-214ENST00000485842 EEFSECP57772 596 aaKnown RBP10.66□□□□□ -0.7
HPS4-214ENST00000485842 COPZ1P61923 177 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 SGCBQ16585 318 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 TMEM176BQ3YBM2 270 aaPredicted RBP10.66□□□□□ -0.7
HPS4-214ENST00000485842 LRRC23Q53EV4 343 aaPredicted RBP10.66□□□□□ -0.7
HPS4-214ENST00000485842 C3orf33Q6P1S2 294 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 C8orf82Q6P1X6 216 aaPredicted RBP10.66□□□□□ -0.7
HPS4-214ENST00000485842 SEM1Q6ZVN7 128 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 GRINAQ7Z429 371 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 P4HA3Q7Z4N8 544 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 LILRA2Q8N149 483 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 TNIP2Q8NFZ5 429 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 OR10D3Q8NH80 312 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 OR2V1Q8NHB1 315 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 ZPLD1Q8TCW7 415 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 ITLN2Q8WWU7 325 aaPredicted RBP10.66□□□□□ -0.7
HPS4-214ENST00000485842 TAMM41Q96BW9 452 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 ZNF845Q96IR2 970 aaPredicted RBP10.66□□□□□ -0.7
HPS4-214ENST00000485842 KLHL15Q96M94 604 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 RSPO3Q9BXY4 272 aaPredicted RBP10.66□□□□□ -0.7
HPS4-214ENST00000485842 SERINC1Q9NRX5 453 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 KLHL28Q9NXS3 571 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 COQ3Q9NZJ6 369 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 ADA2Q9NZK5 511 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 CLCF1Q9UBD9 225 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 RNF6Q9Y252 685 aa10.66□□□□□ -0.7
HPS4-214ENST00000485842 AP3M1Q9Y2T2 418 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms