RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 STC1P52823 247 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 RPS26P11Q5JNZ5 115 aaPredicted RBP9.65□□□□□ -0.86
COL12A1-207ENST00000483888 SFXN4Q6P4A7 337 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 OR4F15Q8NGB8 312 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 CLCF1Q9UBD9 225 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 MN1Q10571 1320 aaPredicted RBP9.65□□□□□ -0.86
COL12A1-207ENST00000483888 CPNE6O95741 557 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 ACP2P11117 423 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 GPX3P22352 226 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 CLDN8P56748 225 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 CDS1Q92903 461 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 BPIFA2Q96DR5 249 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 CMSS1Q9BQ75 279 aaKnown RBP9.65□□□□□ -0.86
COL12A1-207ENST00000483888 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.65□□□□□ -0.86
COL12A1-207ENST00000483888 SLC35D1Q9NTN3 355 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 OARD1Q9Y530 152 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 SLC9B1P1A6NJY1 282 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 SFTA3P0C7M3 94 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 WDR5P61964 334 aaKnown RBP9.65□□□□□ -0.86
COL12A1-207ENST00000483888 PMS2P11Q13670 270 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 OR2G2Q8NGZ5 317 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 OR6F1Q8NGZ6 308 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 OR4K13Q8NH42 304 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 PHOSPHO1Q8TCT1 267 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 ZNF587Q96SQ5 575 aaPredicted RBP9.65□□□□□ -0.86
COL12A1-207ENST00000483888 DISP1Q96F81 1524 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 RFPL4AA6NLU0 287 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 RFPL4AL1F8VTS6 287 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 SOX1O00570 391 aaPredicted RBP9.65□□□□□ -0.86
COL12A1-207ENST00000483888 SYT7O43581 403 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 STATHP02808 62 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 MAT1AQ00266 395 aaKnown RBP9.65□□□□□ -0.86
COL12A1-207ENST00000483888 DHCR24Q15392 516 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 ATPAF1Q5TC12 328 aaPredicted RBP9.65□□□□□ -0.86
COL12A1-207ENST00000483888 PM20D1Q6GTS8 502 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 ACOT7LQ6ZUV0 252 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 C15orf54Q8N8G6 183 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 OR1S2Q8NGQ3 325 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 ZNF461Q8TAF7 563 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 L3HYPDHQ96EM0 354 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 MAGEH1Q9H213 219 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 KCNK12Q9HB15 430 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 ZDHHC3Q9NYG2 299 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 ERCC6L2Q5T890 1561 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 MYOM1P52179 1685 aa9.65□□□□□ -0.86
COL12A1-207ENST00000483888 SYT5O00445 386 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 RPLP2P05387 115 aaKnown RBP9.65□□□□□ -0.87
COL12A1-207ENST00000483888 MLF1P58340 268 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 ZNF266Q14584 549 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 LEG1Q6P5S2 330 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 ZNF836Q6ZNA1 936 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 C11orf49Q9H6J7 331 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 HMX1Q9NP08 348 aaPredicted RBP9.65□□□□□ -0.87
COL12A1-207ENST00000483888 EHFQ9NZC4 300 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 GOLT1BQ9Y3E0 138 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 PCDHA9Q9Y5H5 950 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 TP53BP1Q12888 1972 aaPredicted RBP9.65□□□□□ -0.87
COL12A1-207ENST00000483888 TRABD2BA6NFA1 517 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 TACR2P21452 398 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 CORO1AP31146 461 aaKnown RBP9.65□□□□□ -0.87
COL12A1-207ENST00000483888 TRAPPC6BQ86SZ2 158 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 PITX2Q99697 317 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 HCAR1Q9BXC0 346 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 ZDHHC5Q9C0B5 715 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 CNIH4Q9P003 139 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 SLCO3A1Q9UIG8 710 aa9.65□□□□□ -0.87
COL12A1-207ENST00000483888 MEGF11A6BM72 1044 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 MROH6A6NGR9 719 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 ZNF623O75123 536 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 PPP1R3DO95685 299 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 GJB1P08034 283 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 HTR2CP28335 458 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 OR8D4Q8NGM9 314 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 CDCP1Q9H5V8 836 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 GABRB1P18505 474 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 LIPAP38571 399 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 HIST1H3AP68431 136 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 NKX3-2P78367 333 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 OR2G6Q5TZ20 316 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 RPUSD3Q6P087 351 aaKnown RBP9.64□□□□□ -0.87
COL12A1-207ENST00000483888 LINC00469Q8N7U9 141 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 OR4K5Q8NGD3 323 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 SLC16A10Q8TF71 515 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 UPRTQ96BW1 309 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 SYT17Q9BSW7 474 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 UBQLN3Q9H347 655 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 FCF1Q9Y324 198 aaKnown RBP9.64□□□□□ -0.87
COL12A1-207ENST00000483888 GPR137BO60478 399 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 TAC4Q86UU9 113 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 UROC1Q96N76 676 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 SERINC1Q9NRX5 453 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 TRAV34A0A0B4J273 112 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 PLSCR1O15162 318 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 PSMB10P40306 273 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 LCN6P62502 163 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 BRICD5Q6PL45 260 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 BTNL8Q6UX41 500 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 GPR148Q8TDV2 347 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 PIGVQ9NUD9 493 aa9.64□□□□□ -0.87
COL12A1-207ENST00000483888 CXXC1Q9P0U4 656 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms