RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 OR2V1Q8NHB1 315 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 SPATA3Q8NHX4 192 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 HSD17B8Q92506 261 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 PPCDCQ96CD2 204 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 MTERF3Q96E29 417 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 AMDHD1Q96NU7 426 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 MS4A4EQ96PG1 132 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 SMR3AQ99954 134 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 ACTR6Q9GZN1 396 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 GLIPR2Q9H4G4 154 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 TMEM216Q9P0N5 145 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 MAGEL2Q9UJ55 1249 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 VDAC3Q9Y277 283 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 TMED5Q9Y3A6 229 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 HEATR5AQ86XA9 2040 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 A0A1W2PQD3 144 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 TMEM114B3SHH9 223 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 PPP6CO00743 305 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 PSMB1P20618 241 aaKnown RBP6.48□□□□□ -1.37
BRCA1-214ENST00000477152 ELK4P28324 431 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 SUMO3P55854 103 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-214ENST00000477152 TP53BP2Q13625 1128 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 P2RY6Q15077 328 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 ADAM5Q6NVV9 412 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 BHLHB9Q6PI77 547 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 RPS27LQ71UM5 84 aaKnown RBP6.48□□□□□ -1.37
BRCA1-214ENST00000477152 KRTAP1-3Q8IUG1 177 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 COX18Q8N8Q8 333 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 OR10D3Q8NH80 312 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 B4GALNT2Q8NHY0 566 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 SLC9A6Q92581 669 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 CHMP6Q96FZ7 201 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 LRGUKQ96M69 825 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 PRPF18Q99633 342 aaKnown RBP6.48□□□□□ -1.37
BRCA1-214ENST00000477152 ANKRA2Q9H9E1 313 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 LRTM1Q9HBL6 345 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 ACSS1Q9NUB1 689 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-214ENST00000477152 ZNF701Q9NV72 531 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-214ENST00000477152 C1orf109Q9NX04 203 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 SH3BP4Q9P0V3 963 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 ZNF225Q9UK10 706 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 RNF115Q9Y4L5 304 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 SPEF1Q9Y4P9 236 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 TIMM22Q9Y584 194 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 NF1P21359 2839 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 GTPBP1O00178 669 aaKnown RBP6.48□□□□□ -1.37
BRCA1-214ENST00000477152 ADAMDEC1O15204 470 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 TLX2O43763 284 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-214ENST00000477152 TBX19O60806 448 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 NKX2-2O95096 273 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 PSMG1O95456 288 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 NUDT14O95848 222 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 CELA3BP08861 270 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 CHN1P15882 459 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 FLNAP21333 2647 aaKnown RBP6.48□□□□□ -1.37
BRCA1-214ENST00000477152 PRPH2P23942 346 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 HPCAL1P37235 193 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 PRKAG1P54619 331 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 CLDN20P56880 219 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 DNAJB13P59910 316 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 DMTNQ08495 405 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 HSPB3Q12988 150 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 VEZF1Q14119 521 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 CAPRIN1Q14444 709 aaKnown RBP6.48□□□□□ -1.37
BRCA1-214ENST00000477152 GUSBP1Q15486 140 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.48□□□□□ -1.37
BRCA1-214ENST00000477152 GRAMD1BQ3KR37 738 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 LSM12Q3MHD2 195 aaKnown RBP6.48□□□□□ -1.37
BRCA1-214ENST00000477152 PODNL1Q6PEZ8 512 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 ZYG11AQ6WRX3 759 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 CEP112Q8N8E3 955 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 ROBO4Q8WZ75 1007 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 OSTF1Q92882 214 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 MOAP1Q96BY2 351 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 MUCL1Q96DR8 90 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 C11orf24Q96F05 449 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-214ENST00000477152 RADILQ96JH8 1075 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 KLHL15Q96M94 604 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 CCT7Q99832 543 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 TRMOQ9BU70 441 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 REEP4Q9H6H4 257 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 CNTD2Q9H8S5 307 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 EQTNQ9NQ60 294 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 ATAD3AQ9NVI7 634 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 GIN1Q9NXP7 522 aa6.48□□□□□ -1.37
BRCA1-214ENST00000477152 POLR3HQ9Y535 204 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-214ENST00000477152 ARID1AO14497 2285 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 RAI1Q7Z5J4 1906 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-214ENST00000477152 A0A1W2PP18 115 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 A0A1W2PPR1 153 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 A0A1W2PRB8 838 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 CXCL13O43927 109 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 OXSR1O95747 527 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-214ENST00000477152 SBK3P0C264 359 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 HTR6P50406 440 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 LGALS4P56470 323 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 POU6F2P78424 691 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-214ENST00000477152 SLC18A2Q05940 514 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 NRF1Q16656 503 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 CLEC12BQ2HXU8 276 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms