RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 ROPN1BQ9BZX4 212 aaPredicted RBP7.16□□□□□ -1.26
USP48-207ENST00000471752 BHLHE41Q9C0J9 482 aaPredicted RBP7.16□□□□□ -1.26
USP48-207ENST00000471752 IQCGQ9H095 443 aaKnown RBP7.16□□□□□ -1.26
USP48-207ENST00000471752 PPCSQ9HAB8 311 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 ROPN1Q9HAT0 212 aaPredicted RBP7.16□□□□□ -1.26
USP48-207ENST00000471752 EML4Q9HC35 981 aaKnown RBP7.16□□□□□ -1.26
USP48-207ENST00000471752 CTPS2Q9NRF8 586 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 KLHL13Q9P2N7 655 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 MCTS1Q9ULC4 181 aaKnown RBP7.16□□□□□ -1.26
USP48-207ENST00000471752 FAF1Q9UNN5 650 aaPredicted RBP7.16□□□□□ -1.26
USP48-207ENST00000471752 LAMP3Q9UQV4 416 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 ACTL7BQ9Y614 415 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 PLCE1Q9P212 2302 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 RAI1Q7Z5J4 1906 aaPredicted RBP7.15□□□□□ -1.26
USP48-207ENST00000471752 GOLGA8QA0A0J9YX86 632 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 RNF103-CHMP3A0A140T963 221 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 GOLGA8OA6NCC3 632 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 INAFM1C9JVW0 142 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 GOLGA8NF8WBI6 632 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 ETV2O00321 342 aaPredicted RBP7.15□□□□□ -1.26
USP48-207ENST00000471752 CLOCKO15516 846 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 ZNF264O43296 627 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 PRKD3O94806 890 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 CNOT4O95628 575 aaKnown RBP7.15□□□□□ -1.26
USP48-207ENST00000471752 HSPA4LO95757 839 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 YES1P07947 543 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 DANCRP0C864 163 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 ATP6V1C1P21283 382 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 PGM1P36871 562 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 CDKN1AP38936 164 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 SLC1A6P48664 564 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 C21orf58P58505 322 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 BST1Q10588 318 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 TNK1Q13470 666 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 ZNF141Q15928 474 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 PGGHGQ32M88 737 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 ARHGAP11BQ3KRB8 267 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 KRT71Q3SY84 523 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 TNFAIP8L3Q5GJ75 292 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 SLC25A53Q5H9E4 307 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 BEX5Q5H9J7 111 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 SFRP5Q5T4F7 317 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 SHEQ5VZ18 495 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 HEPHL1Q6MZM0 1159 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 FRRS1Q6ZNA5 592 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 PLEKHM3Q6ZWE6 761 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 ADGRG3Q86Y34 549 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 TMCO5AQ8N6Q1 288 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 KBTBD8Q8NFY9 601 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 OR4A15Q8NGL6 344 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 SFXN5Q8TD22 340 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 ZFP90Q8TF47 636 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 CAVIN3Q969G5 261 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 MRGPRX4Q96LA9 322 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 OR5B2Q96R09 309 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 PIP5K1AQ99755 562 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 C1QTNF6Q9BXI9 259 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 LAT2Q9GZY6 243 aa7.15□□□□□ -1.26
USP48-207ENST00000471752 WDR55Q9H6Y2 383 aaPredicted RBP7.15□□□□□ -1.26
USP48-207ENST00000471752 GDF2Q9UK05 429 aaPredicted RBP7.15□□□□□ -1.26
USP48-207ENST00000471752 ZC3H12DA2A288 527 aaKnown RBP7.14□□□□□ -1.27
USP48-207ENST00000471752 ZNF716A6NP11 495 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 OVOL3O00110 214 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 HMGN4O00479 90 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 SDHDO14521 159 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 HS3ST1O14792 307 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 ABCA1O95477 2261 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 SERPINE1P05121 402 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 HEXAP06865 529 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 FESP07332 822 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 CHRM4P08173 479 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 UBL4AP11441 157 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 FCGR2AP12318 317 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 PSMB1P20618 241 aaKnown RBP7.14□□□□□ -1.27
USP48-207ENST00000471752 IGHV1-2P23083 117 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 ME2P23368 584 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 MAPK1P28482 360 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 LCN1P31025 176 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 EIF1P41567 113 aaKnown RBP7.14□□□□□ -1.27
USP48-207ENST00000471752 RPL14P50914 215 aaKnown RBP7.14□□□□□ -1.27
USP48-207ENST00000471752 ANK2Q01484 3957 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 BSPH1Q075Z2 132 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 LGALS3BPQ08380 585 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 SPOCK1Q08629 439 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 RASGEF1BQ0VAM2 473 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 MERTKQ12866 999 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 CASP8Q14790 479 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 LSM12Q3MHD2 195 aaKnown RBP7.14□□□□□ -1.27
USP48-207ENST00000471752 GTDC1Q4AE62 458 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 NCMAPQ5T1S8 102 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 SAXO2Q658L1 398 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 WDR93Q6P2C0 686 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 BEND4Q6ZU67 534 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 BHLHA15Q7RTS1 189 aaPredicted RBP7.14□□□□□ -1.27
USP48-207ENST00000471752 MAVSQ7Z434 540 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 MTERF4Q7Z6M4 381 aaKnown RBP7.14□□□□□ -1.27
USP48-207ENST00000471752 RNF130Q86XS8 419 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 MISPQ8IVT2 679 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 LRRC75A-AS1Q8N1F1 130 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 PIWIL2Q8TC59 973 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms