RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 EXOSC8Q96B26 276 aaKnown RBP4.59□□□□□ -1.67
PTPN4-209ENST00000469511 MUCL1Q96DR8 90 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 MTBPQ96DY7 904 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 DNAJA3Q96EY1 480 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 SH3YL1Q96HL8 342 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-209ENST00000469511 RADILQ96JH8 1075 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 UBXN10Q96LJ8 280 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 KLHL15Q96M94 604 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 DUX5Q96PT3 197 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 PSD2Q9BQI7 771 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 TRIM5Q9C035 493 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 RHOJQ9H4E5 214 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 NARFLQ9H6Q4 476 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 PTGES2Q9H7Z7 377 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 FANCFQ9NPI8 374 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 MED17Q9NVC6 651 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 H2AFY2Q9P0M6 372 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-209ENST00000469511 MOKQ9UQ07 419 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 OR10H1Q9Y4A9 318 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 ZNF503-AS2A6NEH8 195 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 GOLGA6L10A6NI86 522 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 TRIM77I1YAP6 450 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 NDUFS8O00217 210 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 FOXE1O00358 373 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-209ENST00000469511 DNALI1O14645 258 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-209ENST00000469511 TP73O15350 636 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 PRKD3O94806 890 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 SEMA3DO95025 777 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 IPO7O95373 1038 aaKnown RBP4.58□□□□□ -1.68
PTPN4-209ENST00000469511 UTS2O95399 124 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 IL33O95760 270 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 ITGA5P08648 1049 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 IL3P08700 152 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 LINGO3P0C6S8 592 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 FAHP16930 419 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 ADRA2CP18825 462 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 TSPAN8P19075 237 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 PGCP20142 388 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 PTAFRP25105 342 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 RBMXP38159 391 aaKnown RBP4.58□□□□□ -1.68
PTPN4-209ENST00000469511 PRIM2P49643 509 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 MAPK12P53778 367 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 DVL1P1P54792 670 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-209ENST00000469511 RAE1P78406 368 aaKnown RBP4.58□□□□□ -1.68
PTPN4-209ENST00000469511 SLC18A2Q05940 514 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 C17orf67Q0P5P2 114 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 ZNF155Q12901 538 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-209ENST00000469511 FOXF1Q12946 379 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 GTF2H2Q13888 395 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 MLC1Q15049 377 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 ACAP2Q15057 778 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 CD226Q15762 336 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 GABRA6Q16445 453 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 PFKFB4Q16877 469 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 NDUFAF6Q330K2 333 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 TMEM176BQ3YBM2 270 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-209ENST00000469511 TCHHL1Q5QJ38 904 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-209ENST00000469511 ZNF544Q6NX49 715 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 GTF2H2CQ6P1K8 395 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 TMEM108Q6UXF1 575 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 TDRPQ86YL5 185 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 LRRC17Q8N6Y2 441 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 L3MBTL4Q8NA19 623 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 OR52E4Q8NGH9 312 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 ZBTB8AQ96BR9 441 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 MRGPRX4Q96LA9 322 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 SLC6A7Q99884 636 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 BAG1Q99933 345 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-209ENST00000469511 CENPKQ9BS16 269 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 TRMOQ9BU70 441 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 SEC61A2Q9H9S3 476 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 PFDN4Q9NQP4 134 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 SDHAF3Q9NRP4 125 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 FAM120CQ9NX05 1096 aaKnown RBP4.58□□□□□ -1.68
PTPN4-209ENST00000469511 NUDT4Q9NZJ9 180 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 UTS2RQ9UKP6 389 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 ICAM5Q9UMF0 924 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 PPIAL4AQ9Y536 164 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 SNX8Q9Y5X2 465 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 PMF1-BGLAPU3KQ54 211 aa4.58□□□□□ -1.68
PTPN4-209ENST00000469511 TMEM129A0AVI4 362 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 CCT8L1PA6NM43 557 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 UPK1AO00322 258 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 ZNF195O14628 629 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 KLF11O14901 512 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 H6PDO95479 791 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 OXSR1O95747 527 aaPredicted RBP4.57□□□□□ -1.68
PTPN4-209ENST00000469511 PDYNP01213 254 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 S100BP04271 92 aaPredicted RBP4.57□□□□□ -1.68
PTPN4-209ENST00000469511 HKR1P10072 659 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 COL8A2P25067 703 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 GIFP27352 417 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 SSTR1P30872 391 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 LSP1P33241 339 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 GABRA3P34903 492 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 ZNF75DP51815 510 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 CHN2P52757 468 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 ATP6V0D1P61421 351 aa4.57□□□□□ -1.68
PTPN4-209ENST00000469511 UBA52P62987 128 aaKnown RBP4.57□□□□□ -1.68
PTPN4-209ENST00000469511 CHRNB3Q05901 458 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms