RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 OR7G1Q8NGA0 311 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 OR1N1Q8NGS0 311 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 C16orf52Q8NHV5 167 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 PSMA8Q8TAA3 256 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF675Q8TD23 568 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF721Q8TF20 911 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 SPSB4Q96A44 273 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 GIMAP5Q96F15 307 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 RMND5BQ96G75 393 aaPredicted RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 VMP1Q96GC9 406 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 TMEM19Q96HH6 336 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 REXO5Q96IC2 774 aaKnown RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 RSRC1Q96IZ7 334 aaKnown RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 TPD52L3Q96J77 140 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ART5Q96L15 291 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 NSMCE2Q96MF7 247 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF578Q96N58 590 aaPredicted RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 MS4A4EQ96PG1 132 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 SEPHS2Q99611 448 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 DEFB126Q9BYW3 111 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 MS4A7Q9GZW8 240 aaPredicted RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 PIGUQ9H490 435 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 CDCP1Q9H5V8 836 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 DENND2DQ9H6A0 471 aaPredicted RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 WDR54Q9H977 334 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ZBTB20Q9HC78 741 aaPredicted RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ASCL3Q9NQ33 180 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 EXD2Q9NVH0 621 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 P4HTMQ9NXG6 502 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ABCD2Q9UBJ2 740 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 P2RX2Q9UBL9 471 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF639Q9UID6 485 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 KCND3Q9UK17 655 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 MKLN1Q9UL63 735 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 AURKCQ9UQB9 309 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 POMPQ9Y244 141 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ANGPT4Q9Y264 503 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 CFL2Q9Y281 166 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 DTX4Q9Y2E6 619 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 NEUROG3Q9Y4Z2 214 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 PCDHGB3Q9Y5G1 929 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 NUP214P35658 2090 aaPredicted RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 COL27A1Q8IZC6 1860 aaPredicted RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 CCDC88CQ9P219 2028 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 IGHV1-45A0A0A0MS14 117 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ARGFXA6NJG6 315 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 A8MVJ9 347 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 C21orf140B9A014 251 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 H0Y3Z8 333 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 KLK10O43240 276 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 TLX3O43711 291 aaPredicted RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 GMFGO60234 142 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 TPST1O60507 370 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 FCMRO60667 390 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ENTPD5O75356 428 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 KCNK2O95069 426 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 NKX2-2O95096 273 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 PGM3O95394 542 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 H6PDO95479 791 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 AGR2O95994 175 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 F10P00742 488 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ALPPP05187 535 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 CHRM4P08173 479 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 TFPTP0C1Z6 253 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 HKR1P10072 659 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 LIPCP11150 499 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 COX6A1P12074 109 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 HSD17B1P14061 328 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 PPP3CBP16298 524 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ATP6V1B2P21281 511 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ATP6V1C1P21283 382 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ITGA3P26006 1051 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 KDELR2P33947 212 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 KRT20P35900 424 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 PLA2G5P39877 138 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 PPICP45877 212 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 YAP1P46937 504 aaKnown RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 CCL11P51671 97 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 CRISP3P54108 245 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 POLE2P56282 527 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 SLC37A1P57057 533 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ELF3P78545 371 aaPredicted RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 HPCAP84074 193 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 PSG6Q00889 435 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 RBBP4Q09028 425 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 PLCXD2Q0VAA5 305 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 TRAP1Q12931 704 aaKnown RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 BNIP2Q12982 314 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 CHAF1BQ13112 559 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 FADDQ13158 208 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 RAPSNQ13702 412 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ATP1A4Q13733 1029 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 CCNIQ14094 377 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 DAG1Q14118 895 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 EXT1Q16394 746 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 DECR1Q16698 335 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF630Q2M218 657 aaPredicted RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 DEFB109BQ30KR1 87 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ARHGAP11BQ3KRB8 267 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 TBC1D25Q3MII6 688 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms