RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 NDUFAF7Q7L592 441 aa13.04□□□□□ -0.32
USP39-207ENST00000450066 MISPQ8IVT2 679 aa13.04□□□□□ -0.32
USP39-207ENST00000450066 OR11G2Q8NGC1 345 aa13.04□□□□□ -0.32
USP39-207ENST00000450066 M1APQ8TC57 530 aa13.04□□□□□ -0.32
USP39-207ENST00000450066 CT55Q8WUE5 264 aa13.04□□□□□ -0.32
USP39-207ENST00000450066 TMCO6Q96DC7 493 aa13.04□□□□□ -0.32
USP39-207ENST00000450066 ATP13A2Q9NQ11 1180 aa13.04□□□□□ -0.32
USP39-207ENST00000450066 FAM86C1Q9NVL1 165 aa13.04□□□□□ -0.32
USP39-207ENST00000450066 TVP23BQ9NYZ1 205 aa13.04□□□□□ -0.32
USP39-207ENST00000450066 FOXJ2Q9P0K8 574 aa13.04□□□□□ -0.32
USP39-207ENST00000450066 PSORS1C1Q9UIG5 152 aa13.04□□□□□ -0.32
USP39-207ENST00000450066 TCFL5Q9UL49 500 aa13.04□□□□□ -0.32
USP39-207ENST00000450066 ICAM5Q9UMF0 924 aa13.04□□□□□ -0.32
USP39-207ENST00000450066 PCDHGB1Q9Y5G3 927 aa13.04□□□□□ -0.32
USP39-207ENST00000450066 SNX5Q9Y5X3 404 aa13.04□□□□□ -0.32
USP39-207ENST00000450066 CLCA1A8K7I4 914 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 SOCS6O14544 535 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 DKK1O94907 266 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 JUNBP17275 347 aaPredicted RBP13.03□□□□□ -0.32
USP39-207ENST00000450066 SLC1A3P43003 542 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 PCYT1AP49585 367 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 FBXW4P57775 412 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 EFNB1P98172 346 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 PIGFQ07326 219 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 C3orf38Q5JPI3 329 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 TMEM201Q5SNT2 666 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 SLC25A30Q5SVS4 291 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 BORAQ6PGQ7 559 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 NUP54Q7Z3B4 507 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 SLC15A4Q8N697 577 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 SLC22A8Q8TCC7 542 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 BRIX1Q8TDN6 353 aaKnown RBP13.03□□□□□ -0.32
USP39-207ENST00000450066 TTC9Q92623 222 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 HGDQ93099 445 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 SH3YL1Q96HL8 342 aaPredicted RBP13.03□□□□□ -0.32
USP39-207ENST00000450066 Q96MT0 163 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 IL4I1Q96RQ9 567 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 TSSK6Q9BXA6 273 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 PRRG3Q9BZD7 231 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 SLC19A3Q9BZV2 496 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 MMP25Q9NPA2 562 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 TBC1D23Q9NUY8 699 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 ERVK-18Q9QC07 812 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 HEATR5AQ86XA9 2040 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 HTR3EA5X5Y0 456 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 RGS10O43665 173 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 OR2J2O76002 312 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 XAF1Q6GPH4 301 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 RPL13AP3Q6NVV1 102 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 ATG4DQ86TL0 474 aaPredicted RBP13.03□□□□□ -0.32
USP39-207ENST00000450066 FAM26EQ8N5C1 309 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 ESX1Q8N693 406 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 TCEANCQ8N8B7 351 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 DEFB124Q8NES8 71 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 OR5W2Q8NH69 310 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 TMIGD2Q96BF3 282 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 TUBA1CQ9BQE3 449 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 RHNO1Q9BSD3 238 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 TEX12Q9BXU0 123 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 CCDC90BQ9GZT6 254 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 FKBP14Q9NWM8 211 aa13.03□□□□□ -0.32
USP39-207ENST00000450066 FARSAQ9Y285 508 aaKnown RBP13.03□□□□□ -0.32
USP39-207ENST00000450066 EFCAB9A8MZ26 197 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 ADAM10O14672 748 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 SCO2O43819 266 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 FBXO45P0C2W1 286 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 SAGP10523 405 aaPredicted RBP13.02□□□□□ -0.33
USP39-207ENST00000450066 MST1P26927 711 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 RPS15P62841 145 aaKnown RBP13.02□□□□□ -0.33
USP39-207ENST00000450066 PMS2P3Q13401 168 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 SSPNQ14714 243 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 NEDD8Q15843 81 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 OCLNQ16625 522 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 ZBED5Q49AG3 693 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 CLEC12AQ5QGZ9 265 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 LYPD8Q6UX82 237 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 PRSS48Q7RTY5 328 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 OR2T33Q8NG76 320 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 OR5M3Q8NGP4 307 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 ZNF563Q8TA94 476 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 FANK1Q8TC84 345 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 RNF138Q8WVD3 245 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 NACC2Q96BF6 587 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 DGCR14Q96DF8 476 aaKnown RBP13.02□□□□□ -0.33
USP39-207ENST00000450066 SLC38A2Q96QD8 506 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 SIGLEC11Q96RL6 698 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 COPS4Q9BT78 406 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 B3GNT4Q9C0J1 378 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 ADAM19Q9H013 955 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 RBM38Q9H0Z9 239 aaKnown RBP13.02□□□□□ -0.33
USP39-207ENST00000450066 C12orf10Q9HB07 376 aa13.02□□□□□ -0.33
USP39-207ENST00000450066 NSG1A0A0A6YYJ2 146 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 ELOA3DA6NLF2 546 aaPredicted RBP13.01□□□□□ -0.33
USP39-207ENST00000450066 TLX2O43763 284 aaPredicted RBP13.01□□□□□ -0.33
USP39-207ENST00000450066 PRKYO43930 277 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 ENTPD6O75354 484 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 RCBTB2O95199 551 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 IGF2P01344 180 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 PGCP20142 388 aa13.01□□□□□ -0.33
USP39-207ENST00000450066 ITPKBP27987 946 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms