RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 ACAA2P42765 397 aaKnown RBP11.89□□□□□ -0.51
LINC00399-201ENST00000439008 ANXA11P50995 505 aaKnown RBP11.89□□□□□ -0.51
LINC00399-201ENST00000439008 ARFIP2P53365 341 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 SEC24CP53992 1094 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 KRTAP10-9P60411 292 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 EEF1A1P68104 462 aaKnown RBP11.89□□□□□ -0.51
LINC00399-201ENST00000439008 IRX1P78414 480 aaPredicted RBP11.89□□□□□ -0.51
LINC00399-201ENST00000439008 HPCAP84074 193 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 KLF10Q13118 480 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 CBFBQ13951 182 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 SF3B4Q15427 424 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC00399-201ENST00000439008 TMEM176BQ3YBM2 270 aaPredicted RBP11.89□□□□□ -0.51
LINC00399-201ENST00000439008 FBXL19-AS1Q494R0 122 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 PLEKHM3Q6ZWE6 761 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 BTLAQ7Z6A9 289 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 OR52P1PQ8NH57 321 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 OR2V1Q8NHB1 315 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 WDR60Q8WVS4 1066 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 OIT3Q8WWZ8 545 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 OSTF1Q92882 214 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 MRGPRX4Q96LA9 322 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 KLHL15Q96M94 604 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 CGREF1Q99674 301 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 CCDC106Q9BWC9 280 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 RABEP2Q9H5N1 569 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 HHATLQ9HCP6 504 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 EXOSC3Q9NQT5 275 aaKnown RBP11.89□□□□□ -0.51
LINC00399-201ENST00000439008 CTPS2Q9NRF8 586 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 ACER3Q9NUN7 267 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 CLEC4AQ9UMR7 237 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 TRIM33Q9UPN9 1127 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 SLC35A3Q9Y2D2 325 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 ZNF175Q9Y473 711 aa11.89□□□□□ -0.51
LINC00399-201ENST00000439008 CDHR4A6H8M9 788 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 FXYD1O00168 92 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 SYT5O00445 386 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 GCM2O75603 506 aaPredicted RBP11.88□□□□□ -0.51
LINC00399-201ENST00000439008 PGM3O95394 542 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 CGAP01215 116 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 DBIP07108 87 aaKnown RBP11.88□□□□□ -0.51
LINC00399-201ENST00000439008 ELK4P28324 431 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 ASCL1P50553 236 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 CRISP3P54108 245 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 FADDQ13158 208 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 CAPRIN1Q14444 709 aaKnown RBP11.88□□□□□ -0.51
LINC00399-201ENST00000439008 HBMQ6B0K9 141 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 ESPNLQ6ZVH7 1005 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 DHDDSQ86SQ9 333 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 ADGRG3Q86Y34 549 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 PTOV1Q86YD1 416 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 NFKBIDQ8NI38 313 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 ROBO4Q8WZ75 1007 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 ST8SIA1Q92185 356 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 DNAJA3Q96EY1 480 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 ANKRD27Q96NW4 1050 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 WFDC6Q9BQY6 131 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 SLC39A3Q9BRY0 314 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 BCL2L10Q9HD36 194 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 KLHL14Q9P2G3 628 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 LEF1Q9UJU2 399 aaPredicted RBP11.88□□□□□ -0.51
LINC00399-201ENST00000439008 ZNF443Q9Y2A4 671 aaPredicted RBP11.88□□□□□ -0.51
LINC00399-201ENST00000439008 NDUFAF1Q9Y375 327 aa11.88□□□□□ -0.51
LINC00399-201ENST00000439008 IGHV3-15A0A0B4J1V0 119 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 A0A0G2JPF8 293 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 HNRNPCL2B2RXH8 293 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 HNRNPCL3B7ZW38 293 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 EEF1E1-BLOC1S5C9J1V9 151 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 EEF1E1O43324 174 aaKnown RBP11.87□□□□□ -0.51
LINC00399-201ENST00000439008 FRS3O43559 492 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 TPST1O60507 370 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 HNRNPCL1O60812 293 aaKnown RBP11.87□□□□□ -0.51
LINC00399-201ENST00000439008 HNRNPCL4P0DMR1 293 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 IL7RP16871 459 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 PGCP20142 388 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 OPRM1P35372 400 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 IDH2P48735 452 aaKnown RBP11.87□□□□□ -0.51
LINC00399-201ENST00000439008 GZMMP51124 257 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 EEFSECP57772 596 aaKnown RBP11.87□□□□□ -0.51
LINC00399-201ENST00000439008 MTPNP58546 118 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 SIRPAP78324 504 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 HOXC5Q00444 222 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 MERTKQ12866 999 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 EPS8Q12929 822 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 SGCBQ16585 318 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 GLIPR1L2Q4G1C9 344 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 ZNF474Q6S9Z5 364 aaPredicted RBP11.87□□□□□ -0.51
LINC00399-201ENST00000439008 CHMP1BQ7LBR1 199 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 P4HA3Q7Z4N8 544 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 LUZP2Q86TE4 346 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 CMIPQ8IY22 773 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 PEX5LQ8IYB4 626 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 TSPEARQ8WU66 669 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 PMM1Q92871 262 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 ARL5BQ96KC2 179 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 ZFP3Q96NJ6 502 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 SFXN3Q9BWM7 321 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 OR11A1Q9GZK7 315 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 OPN3Q9H1Y3 402 aaPredicted RBP11.87□□□□□ -0.51
LINC00399-201ENST00000439008 ARMCX1Q9P291 453 aa11.87□□□□□ -0.51
LINC00399-201ENST00000439008 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms