RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 ELK4P28324 431 aa14□□□□□ -0.17
TREX1-201ENST00000433541 CLDN18P56856 261 aa14□□□□□ -0.17
TREX1-201ENST00000433541 CLDN20P56880 219 aa14□□□□□ -0.17
TREX1-201ENST00000433541 RAC1P63000 192 aa14□□□□□ -0.17
TREX1-201ENST00000433541 EEF1A1P68104 462 aaKnown RBP14□□□□□ -0.17
TREX1-201ENST00000433541 BCL2A1Q16548 175 aa14□□□□□ -0.17
TREX1-201ENST00000433541 AP1ARQ63HQ0 302 aa14□□□□□ -0.17
TREX1-201ENST00000433541 C3orf33Q6P1S2 294 aa14□□□□□ -0.17
TREX1-201ENST00000433541 NET1Q7Z628 596 aaPredicted RBP14□□□□□ -0.17
TREX1-201ENST00000433541 PATL1Q86TB9 770 aaKnown RBP14□□□□□ -0.17
TREX1-201ENST00000433541 LACC1Q8IV20 430 aa14□□□□□ -0.17
TREX1-201ENST00000433541 CLIP4Q8N3C7 705 aa14□□□□□ -0.17
TREX1-201ENST00000433541 SMYD1Q8NB12 490 aa14□□□□□ -0.17
TREX1-201ENST00000433541 BHLHE22Q8NFJ8 381 aaPredicted RBP14□□□□□ -0.17
TREX1-201ENST00000433541 RNF217Q8TC41 542 aa14□□□□□ -0.17
TREX1-201ENST00000433541 POC1BQ8TC44 478 aa14□□□□□ -0.17
TREX1-201ENST00000433541 CA5BP1Q8WTZ4 195 aa14□□□□□ -0.17
TREX1-201ENST00000433541 PHF10Q8WUB8 498 aaKnown RBP14□□□□□ -0.17
TREX1-201ENST00000433541 DMRTA2Q96SC8 542 aa14□□□□□ -0.17
TREX1-201ENST00000433541 RPS6KB2Q9UBS0 482 aa14□□□□□ -0.17
TREX1-201ENST00000433541 SPIN1Q9Y657 262 aaPredicted RBP14□□□□□ -0.17
TREX1-201ENST00000433541 MPDZO75970 2070 aa14□□□□□ -0.17
TREX1-201ENST00000433541 NCOA6Q14686 2063 aaPredicted RBP14□□□□□ -0.17
TREX1-201ENST00000433541 LRRK2Q5S007 2527 aa14□□□□□ -0.17
TREX1-201ENST00000433541 USP9XQ93008 2570 aaPredicted RBP13.99□□□□□ -0.17
TREX1-201ENST00000433541 MED12LQ86YW9 2145 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 FAM220BPB1ANY3 271 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 H0YC42 278 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 TNFSF11O14788 317 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 FRS3O43559 492 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 SYNGR4O95473 234 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 GLI4P10075 376 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 CCNA2P20248 432 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 ADH6P28332 368 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 PRKAR1BP31321 381 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 TPD52P55327 224 aaPredicted RBP13.99□□□□□ -0.17
TREX1-201ENST00000433541 CLDN15P56746 228 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 ADORA2A-AS1P86434 159 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 EPS8Q12929 822 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 SELENBP1Q13228 472 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 LRRC23Q53EV4 343 aaPredicted RBP13.99□□□□□ -0.17
TREX1-201ENST00000433541 NSUN5P2Q63ZY6 315 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 HBMQ6B0K9 141 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 RTL6Q6ICC9 239 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 PLXDC2Q6UX71 529 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 HACD2Q6Y1H2 254 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 MARVELD2Q8N4S9 558 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 ZNF808Q8N4W9 903 aaPredicted RBP13.99□□□□□ -0.17
TREX1-201ENST00000433541 ZPLD1Q8TCW7 415 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 REXO5Q96IC2 774 aaKnown RBP13.99□□□□□ -0.17
TREX1-201ENST00000433541 KLHL15Q96M94 604 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 ACER3Q9NUN7 267 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 ARL8BQ9NVJ2 186 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 USP22Q9UPT9 525 aa13.99□□□□□ -0.17
TREX1-201ENST00000433541 SPTBN1Q01082 2364 aaKnown RBP13.98□□□□□ -0.17
TREX1-201ENST00000433541 CACNA1CQ13936 2221 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 ELOVL7A1L3X0 281 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 SLC22A20A6NK97 555 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 M0QX08 132 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 EPPINO95925 133 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 IFNA14P01570 189 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 IL11P20809 199 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 HTR3AP46098 478 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 MNAT1P51948 309 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 SUCLG1P53597 346 aaKnown RBP13.98□□□□□ -0.17
TREX1-201ENST00000433541 RGS8P57771 180 aaPredicted RBP13.98□□□□□ -0.17
TREX1-201ENST00000433541 PSME3P61289 254 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 LIPEQ05469 1076 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 TMEM44Q2T9K0 475 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 TMEM176BQ3YBM2 270 aaPredicted RBP13.98□□□□□ -0.17
TREX1-201ENST00000433541 ESPNLQ6ZVH7 1005 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 PLEKHM3Q6ZWE6 761 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 GRINAQ7Z429 371 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 CCDC71Q8IV32 467 aaPredicted RBP13.98□□□□□ -0.17
TREX1-201ENST00000433541 MICU2Q8IYU8 434 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 ZNF583Q96ND8 569 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 OR5B2Q96R09 309 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 KCTD14Q9BQ13 255 aaPredicted RBP13.98□□□□□ -0.17
TREX1-201ENST00000433541 ALG2Q9H553 416 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 CALHM2Q9HA72 323 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 SPAG4Q9NPE6 437 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 TIGARQ9NQ88 270 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 CTPS2Q9NRF8 586 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 CMTM6Q9NX76 183 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 MCTS1Q9ULC4 181 aaKnown RBP13.98□□□□□ -0.17
TREX1-201ENST00000433541 RNF6Q9Y252 685 aa13.98□□□□□ -0.17
TREX1-201ENST00000433541 CLEC18AA5D8T8 446 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 FAM90A27PA6NNH2 459 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 CXCL13O43927 109 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 GMNNO75496 209 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 RNF224P0DH78 156 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 CXCR1P25024 350 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 CHRNB4P30926 498 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 APOBEC1P41238 236 aaKnown RBP13.97□□□□□ -0.17
TREX1-201ENST00000433541 POLR2HP52434 150 aaKnown RBP13.97□□□□□ -0.17
TREX1-201ENST00000433541 HOXC5Q00444 222 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 PLAURQ03405 335 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 DMTNQ08495 405 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 PON3Q15166 354 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 WBP2NLQ6ICG8 309 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms