RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 TMEM163Q8TC26 289 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 KATNB1Q9BVA0 655 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 RNF32Q9H0A6 362 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 IKZF4Q9H2S9 585 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 RFXAPO00287 272 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 PIRO00625 290 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 C19orf35Q6ZS72 473 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 LILRB4Q8NHJ6 448 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 PSD2Q9BQI7 771 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 A0A0D9SEW6 157 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 TXNL1O43396 289 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 FGF18O76093 207 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 ACP2P11117 423 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 SYN1P17600 705 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 RNF4P78317 190 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 ACSM3Q53FZ2 586 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 SMOQ99835 787 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 INIPQ9NRY2 104 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 TCRBV21S2A2A0A5A6 115 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 TMEM82A0PJX8 343 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 FOLR3P41439 243 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 CLDN6P56747 220 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 WDR5P61964 334 aaKnown RBP13.58□□□□□ -0.24
PTPN13-203ENST00000427191 SOHLH1Q5JUK2 328 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 CPOQ8IVL8 374 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 KDM1BQ8NB78 822 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 ZNF300Q96RE9 604 aaPredicted RBP13.58□□□□□ -0.24
PTPN13-203ENST00000427191 ARHGAP33O14559 1287 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 SPINT3P49223 89 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 ZNF322Q6U7Q0 402 aaPredicted RBP13.58□□□□□ -0.24
PTPN13-203ENST00000427191 NKAIN3Q8N8D7 197 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 SEMA6CQ9H3T2 930 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 TAS2R16Q9NYV7 291 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 OR6C2Q9NZP2 312 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 WIF1Q9Y5W5 379 aa13.58□□□□□ -0.24
PTPN13-203ENST00000427191 HIDE1A8MVS5 230 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 CTSL3PQ5NE16 218 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 ASB13Q8WXK3 278 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 ACOT11Q8WXI4 607 aaPredicted RBP13.57□□□□□ -0.24
PTPN13-203ENST00000427191 OR5B2Q96R09 309 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 ZFYVE21Q9BQ24 234 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 CLSTN3Q9BQT9 956 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 EMC7Q9NPA0 242 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 EHFQ9NZC4 300 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 OR5K3A6NET4 321 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 ZNF860A6NHJ4 632 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 CXADRP78310 365 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 BPHLQ86WA6 291 aaPredicted RBP13.57□□□□□ -0.24
PTPN13-203ENST00000427191 RADILQ96JH8 1075 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 ZNF691Q5VV52 312 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 KDF1Q8NAX2 398 aaPredicted RBP13.57□□□□□ -0.24
PTPN13-203ENST00000427191 ACVR1CQ8NER5 493 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 OR11L1Q8NGX0 322 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 ZDHHC7Q9NXF8 308 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 KCTD3Q9Y597 815 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 PCDHGA7Q9Y5G6 932 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 ZNF541Q9H0D2 1346 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 GIFP27352 417 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 SOX3P41225 446 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 SLC22A6Q4U2R8 563 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 TMEM31Q5JXX7 168 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 MISPQ8IVT2 679 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 TMEM151BQ8IW70 566 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 OR2T11Q8NH01 316 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 SFXN2Q96NB2 322 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 DPH2Q9BQC3 489 aaPredicted RBP13.57□□□□□ -0.24
PTPN13-203ENST00000427191 PEAK1Q9H792 1746 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 PPP1R2P9O14990 202 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 DFFBO76075 338 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 JUNDP17535 347 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 GKP32189 559 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 MEPCEQ7L2J0 689 aaKnown RBP13.57□□□□□ -0.24
PTPN13-203ENST00000427191 ROBO1Q9Y6N7 1651 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 SULT2B1O00204 365 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 COCHO43405 550 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 RGS11O94810 467 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 APOA2P02652 100 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 CCL5P13501 91 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 SNU13P55769 128 aaKnown RBP13.57□□□□□ -0.24
PTPN13-203ENST00000427191 LTBQ06643 244 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 PIGFQ07326 219 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 MGAT3Q09327 533 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 BAGE3Q86Y29 109 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 BAGE2Q86Y30 109 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 F2RL3Q96RI0 385 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 MOKQ9UQ07 419 aa13.57□□□□□ -0.24
PTPN13-203ENST00000427191 AK6Q9Y3D8 172 aaKnown RBP13.57□□□□□ -0.24
PTPN13-203ENST00000427191 ZDHHC11BP0C7U3 371 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 PSMB3P49720 205 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 RBPJQ06330 500 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 MRPL10Q7Z7H8 261 aaKnown RBP13.56□□□□□ -0.24
PTPN13-203ENST00000427191 CBARPQ8N350 705 aaPredicted RBP13.56□□□□□ -0.24
PTPN13-203ENST00000427191 PXYLP1Q8TE99 480 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 UQCC2Q9BRT2 126 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 FBRSL1Q9HCM7 1045 aaKnown RBP13.56□□□□□ -0.24
PTPN13-203ENST00000427191 PLEK2Q9NYT0 353 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 PCDHB10Q9UN67 800 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 CPNE6O95741 557 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 GPR155Q7Z3F1 870 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 TFAP2CQ92754 450 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms