RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 ACP2P11117 423 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 PPOXP50336 477 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 IDH3GP51553 393 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-206ENST00000426196 CSNK2A1P68400 391 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-206ENST00000426196 CCNIQ14094 377 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 PDK3Q15120 406 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 TOMM34Q15785 309 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-206ENST00000426196 TSNAXIP1Q2TAA8 658 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 SPDYAQ5MJ70 313 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 C1QTNF12Q5T7M4 302 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 ABLIM2Q6H8Q1 611 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 FAM71E1Q6IPT2 247 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 CBLN3Q6UW01 205 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 SHISA2Q6UWI4 295 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 IKBIPQ70UQ0 350 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 WDR31Q8NA23 367 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 C1orf162Q8NEQ5 155 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-206ENST00000426196 NUP43Q8NFH3 380 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 METTL6Q8TCB7 284 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 MS4A4EQ96PG1 132 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 IQCGQ9H095 443 aaKnown RBP12.37□□□□□ -0.43
HDAC6-206ENST00000426196 DPH5Q9H2P9 285 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 SLC17A5Q9NRA2 495 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 CA10Q9NS85 328 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 ICAM5Q9UMF0 924 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 CARD8Q9Y2G2 431 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 GRIP1Q9Y3R0 1128 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 PCDHGB1Q9Y5G3 927 aa12.37□□□□□ -0.43
HDAC6-206ENST00000426196 CCDC188H7C350 402 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 GTPBP1O00178 669 aaKnown RBP12.36□□□□□ -0.43
HDAC6-206ENST00000426196 GPR171O14626 319 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 MRPL33O75394 65 aaKnown RBP12.36□□□□□ -0.43
HDAC6-206ENST00000426196 PDE5AO76074 875 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 H6PDO95479 791 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 WNT11O96014 354 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 ALOX5P09917 674 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 DDX5P17844 614 aaKnown RBP12.36□□□□□ -0.43
HDAC6-206ENST00000426196 PGCP20142 388 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 HSD17B3P37058 310 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 DIO1P49895 249 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 HTR6P50406 440 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 TGFBR3Q03167 851 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 CLCQ05315 142 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 DUSP5Q16690 384 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 CCNJQ5T5M9 372 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 GPRIN3Q6ZVF9 776 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 ZNF551Q7Z340 670 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-206ENST00000426196 LRRC8AQ8IWT6 810 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 TMCO5AQ8N6Q1 288 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 LRRC17Q8N6Y2 441 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 SLC16A11Q8NCK7 471 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 GPR119Q8TDV5 335 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 NEU4Q8WWR8 484 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-206ENST00000426196 ZHX1-C8orf76Q96EF9 292 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 ZNF382Q96SR6 550 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 ZNF747Q9BV97 191 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 C1QTNF3Q9BXJ4 246 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 SIRT5Q9NXA8 310 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 DCTN4Q9UJW0 460 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 USP22Q9UPT9 525 aa12.36□□□□□ -0.43
HDAC6-206ENST00000426196 WBP11Q9Y2W2 641 aaKnown RBP12.36□□□□□ -0.43
HDAC6-206ENST00000426196 CCDC151A5D8V7 595 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 SULT2B1O00204 365 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 PDPK1O15530 556 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 OIP5O43482 229 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 IFNGR1P15260 489 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 ATP6V1C1P21283 382 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 EPHA1P21709 976 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 MAGEA4P43358 317 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 CCR4P51679 360 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 ARFIP2P53365 341 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 FOXG1P55316 489 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-206ENST00000426196 PRPS1P60891 318 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 POU6F2P78424 691 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-206ENST00000426196 SLC25A3Q00325 362 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 TRIP10Q15642 601 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 EFNB3Q15768 340 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 SLC25A53Q5H9E4 307 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 C9orf135Q5VTT2 229 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 TREML4Q6UXN2 200 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 THSD4Q6ZMP0 1018 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 TMPPEQ6ZT21 453 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 MTDHQ86UE4 582 aaKnown RBP12.35□□□□□ -0.43
HDAC6-206ENST00000426196 SVOPLQ8N434 492 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 TEX29Q8N6K0 151 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 OR52E4Q8NGH9 312 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 RFWD2Q8NHY2 731 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 ZFP28Q8NHY6 868 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 JADE3Q92613 823 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 TMEM186Q96B77 213 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 MRPL57Q9BQC6 102 aaKnown RBP12.35□□□□□ -0.43
HDAC6-206ENST00000426196 MRPL46Q9H2W6 279 aaKnown RBP12.35□□□□□ -0.43
HDAC6-206ENST00000426196 PLK3Q9H4B4 646 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 HIF1ANQ9NWT6 349 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 UPB1Q9UBR1 384 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 SPEF1Q9Y4P9 236 aa12.35□□□□□ -0.43
HDAC6-206ENST00000426196 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.34□□□□□ -0.43
HDAC6-206ENST00000426196 A8MT66 165 aa12.34□□□□□ -0.43
HDAC6-206ENST00000426196 SUPT7LO94864 414 aa12.34□□□□□ -0.43
HDAC6-206ENST00000426196 OR4A8P0C604 315 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms