RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 SYNGR3O43761 229 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 KRT34O76011 436 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 APEX1P27695 318 aaKnown RBP5.23□□□□□ -1.57
LMBR1-204ENST00000415428 LIPAP38571 399 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 SSR2P43308 183 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 TPM4P67936 248 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 ERCC6LQ2NKX8 1250 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 HFEQ30201 348 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 ZNF774Q6NX45 483 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 C3orf33Q6P1S2 294 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 LARP4Q71RC2 724 aaKnown RBP eCLIP5.23□□□□□ -1.57
LMBR1-204ENST00000415428 CDRT4Q8N9R6 151 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 DYRK2Q92630 601 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 GTF3AQ92664 365 aaKnown RBP5.23□□□□□ -1.57
LMBR1-204ENST00000415428 CPNE1Q99829 537 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 NMRAL1Q9HBL8 299 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 UBQLN4Q9NRR5 601 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 KLRF1Q9NZS2 232 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 HYDINQ4G0P3 5121 aa5.23□□□□□ -1.57
LMBR1-204ENST00000415428 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.23□□□□□ -1.578e-8■■■■■ 76.2
LMBR1-204ENST00000415428 A0A096LPI6 279 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 SYCE1LA8MT33 242 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 POC1B-GALNT4F8VUJ3 575 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 ANGPTL1O95841 491 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 TGFAP01135 160 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 APRTP07741 180 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 TNNI3P19429 210 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 NR4A1P22736 598 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 SSR1P43307 286 aaKnown RBP5.22□□□□□ -1.57
LMBR1-204ENST00000415428 MTNR1AP48039 350 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 ACSM1Q08AH1 577 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 MGAT5Q09328 741 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 C2orf68Q2NKX9 166 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 TMPPEQ6ZT21 453 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 CHMP1BQ7LBR1 199 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 TUSC5Q8IXB3 177 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 PLD6Q8N2A8 252 aaKnown RBP5.22□□□□□ -1.57
LMBR1-204ENST00000415428 GALNT4Q8N4A0 578 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 FAM71E2Q8N5Q1 922 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 OR5W2Q8NH69 310 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 STAG3L4Q8TBR4 150 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 DCAKDQ8WVC6 231 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 FOXN4Q96NZ1 517 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 SMYD2Q9NRG4 433 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 CA10Q9NS85 328 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 NMRK1Q9NWW6 199 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 SAGP10523 405 aaPredicted RBP5.22□□□□□ -1.57
LMBR1-204ENST00000415428 NTF4P34130 210 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 SERPINB4P48594 390 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 CHIT1Q13231 466 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 TRADDQ15628 312 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 DECR1Q16698 335 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 C6orf163Q5TEZ5 329 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 LRRN1Q6UXK5 716 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 OSTF1Q92882 214 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 PPWD1Q96BP3 646 aaKnown RBP5.22□□□□□ -1.57
LMBR1-204ENST00000415428 TSSK3Q96PN8 268 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 BTBD2Q9BX70 525 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 MS4A5Q9H3V2 200 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 CIDEBQ9UHD4 219 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 VPS13DQ5THJ4 4388 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 NPIPB13A6NJU9 1138 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 NPIPB4C9JG80 1138 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 VAMP5O95183 116 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 ENO1P06733 434 aaKnown RBP5.22□□□□□ -1.57
LMBR1-204ENST00000415428 KRT16P08779 473 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 PDCD1Q15116 288 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 C5orf46Q6UWT4 87 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 B4GALNT2Q8NHY0 566 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 ELP4Q96EB1 424 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 L3HYPDHQ96EM0 354 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 SLC6A7Q99884 636 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 TSPY26PQ9H489 355 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 CYSLTR2Q9NS75 346 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 ATP6V1HQ9UI12 483 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 LEF1Q9UJU2 399 aaPredicted RBP5.22□□□□□ -1.57
LMBR1-204ENST00000415428 FLVCR1Q9Y5Y0 555 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 DNAH2Q9P225 4427 aa5.22□□□□□ -1.57
LMBR1-204ENST00000415428 ACANP16112 2415 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 NPEPPSL1A6NEC2 478 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 UPK1AO00322 258 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 SMNDC1O75940 238 aaKnown RBP eCLIP5.21□□□□□ -1.57
LMBR1-204ENST00000415428 DUS4LO95620 317 aaKnown RBP5.21□□□□□ -1.57
LMBR1-204ENST00000415428 NPR2P20594 1047 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 CALCRP30988 508 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 RAB10P61026 200 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 RPS23P62266 143 aaKnown RBP5.21□□□□□ -1.57
LMBR1-204ENST00000415428 SPOCK1Q08629 439 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 PDAP1Q13442 181 aaKnown RBP5.21□□□□□ -1.57
LMBR1-204ENST00000415428 ODF2Q5BJF6 829 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 C16orf87Q6PH81 154 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 LRFN4Q6PJG9 635 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 CNEP1R1Q8N9A8 125 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 CEP70Q8NHQ1 597 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 ATG4AQ8WYN0 398 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 TRIM44Q96DX7 344 aaPredicted RBP5.21□□□□□ -1.57
LMBR1-204ENST00000415428 TSNARE1Q96NA8 513 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 PRSS50Q9UI38 385 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 PCTPQ9UKL6 214 aa5.21□□□□□ -1.57
LMBR1-204ENST00000415428 SPIN1Q9Y657 262 aaPredicted RBP5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms