RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 OR5F1O95221 314 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 CLEC3BP05452 202 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 ERGP11308 486 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 FOLR1P15328 257 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 SSTR4P31391 388 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 SDC2P34741 201 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 PPICP45877 212 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 CHRNEQ04844 493 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 DNASE1L3Q13609 305 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 KEAP1Q14145 624 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 MOGQ16653 247 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 TIGD6Q17RP2 521 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 HES3Q5TGS1 186 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 SLC27A4Q6P1M0 643 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 IL20RBQ6UXL0 311 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 SNX33Q8WV41 574 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 NXPE2Q96DL1 559 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 TEX37Q96LM6 180 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 MCCC2Q9HCC0 563 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 ABCB9Q9NP78 766 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 CD300AQ9UGN4 299 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF443Q9Y2A4 671 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-211ENST00000413186 UNC13CQ8NB66 2214 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 SH3PXD2BA1X283 911 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 UNC119BA6NIH7 251 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 ZSCAN5BA6NJL1 495 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF264O43296 627 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 LRP3O75074 770 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 SNAP29O95721 258 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 LCN1P31025 176 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 GABREP78334 506 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 CRYZQ08257 329 aaKnown RBP7.91□□□□□ -1.14
SYNE1-211ENST00000413186 C17orf67Q0P5P2 114 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 MLC1Q15049 377 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 PON3Q15166 354 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 CLEC12AQ5QGZ9 265 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 STPG1Q5TH74 334 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 TCEAL6Q6IPX3 200 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 PAMR1Q6UXH9 720 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 NLRC5Q86WI3 1866 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 OR4K5Q8NGD3 323 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 TCEAL3Q969E4 200 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 COX4I2Q96KJ9 171 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 SFXN2Q96NB2 322 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 VSX1Q9NZR4 365 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-211ENST00000413186 MTCL1Q9Y4B5 1905 aaKnown RBP7.91□□□□□ -1.14
SYNE1-211ENST00000413186 NPIPB8E9PQR5 432 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 SOCS2O14508 198 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 RNF13O43567 381 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 RAD1O60671 282 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 CD36P16671 472 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF14P17017 642 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-211ENST00000413186 TGM4P49221 684 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 LUMP51884 338 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-211ENST00000413186 OR2B6P58173 313 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 CXCR4P61073 352 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 LSM3P62310 102 aaKnown RBP7.91□□□□□ -1.14
SYNE1-211ENST00000413186 CD47Q08722 323 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 MAP4K2Q12851 820 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 CCNJQ5T5M9 372 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 SAXO2Q658L1 398 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 WBP2NLQ6ICG8 309 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 QSOX2Q6ZRP7 698 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 HMGN2P46Q86SG4 172 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 SLC25A45Q8N413 288 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 TMEM178AQ8NBL3 297 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 B3GNT7Q8NFL0 401 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 OR2AJ1Q8NGZ0 328 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 FANK1Q8TC84 345 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 SLC2A12Q8TD20 617 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 UFD1Q92890 307 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF764Q96H86 408 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-211ENST00000413186 POLDIP3Q9BY77 421 aaKnown RBP7.91□□□□□ -1.14
SYNE1-211ENST00000413186 PRMT8Q9NR22 394 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-211ENST00000413186 YARS2Q9Y2Z4 477 aaKnown RBP7.91□□□□□ -1.14
SYNE1-211ENST00000413186 GRIP1Q9Y3R0 1128 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 ASB4Q9Y574 426 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 A0A1W2PPV9 198 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 H3BSA7 217 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 MSX1P28360 303 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 SLC9A3P48764 834 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 RAPSNQ13702 412 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 C21orf62-AS1Q17RA5 79 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF829Q3KNS6 432 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-211ENST00000413186 C5orf46Q6UWT4 87 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 POC5Q8NA72 575 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 OR2T33Q8NG76 320 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 C1GALT1C1Q96EU7 318 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 ASB6Q9NWX5 421 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 HTR3EA5X5Y0 456 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 SERINC4A6NH21 518 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 K7EPK0 472 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 M0R3H8 397 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 PRAMEF10O60809 474 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 SCO1O75880 301 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 NPRL3Q12980 569 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 SLC22A10Q63ZE4 541 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 XKRXQ6PP77 449 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 UGT2A3Q6UWM9 527 aa7.91□□□□□ -1.14
SYNE1-211ENST00000413186 DLEU7Q6UYE1 221 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms