RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 USP22Q9UPT9 525 aa9.26□□□□□ -0.93
TSPAN9-202ENST00000407263 GPC6Q9Y625 555 aaPredicted RBP9.26□□□□□ -0.93
TSPAN9-202ENST00000407263 AP4B1Q9Y6B7 739 aa9.26□□□□□ -0.93
TSPAN9-202ENST00000407263 HECTD1Q9ULT8 2610 aa9.26□□□□□ -0.93
TSPAN9-202ENST00000407263 COL12A1Q99715 3063 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 A0A1W2PNR3 127 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 CDHR4A6H8M9 788 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 MBD3L4A6NDZ8 208 aaPredicted RBP9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 MBD3L3A6NE82 208 aaPredicted RBP9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 MBD3L5A6NJ08 208 aaPredicted RBP9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 SLC22A20A6NK97 555 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 CXCL13O43927 109 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 CLDN14O95500 239 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 EPPINO95925 133 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 TGM6O95932 706 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 THBS1P07996 1170 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 CCNA2P20248 432 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 SLC6A2P23975 617 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 CHRNB4P30926 498 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 EIF1P41567 113 aaKnown RBP9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 SLC6A8P48029 635 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 IDH2P48735 452 aaKnown RBP9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 AGFG1P52594 562 aaKnown RBP9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 ZNF136P52737 540 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 RPS3AP61247 264 aaKnown RBP9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 EPS8Q12929 822 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 PON3Q15166 354 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 ADRM1Q16186 407 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 SGCBQ16585 318 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 CTU2Q2VPK5 515 aaKnown RBP9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 RIPPLY2Q5TAB7 128 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 RNF220Q5VTB9 566 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 NANOGP8Q6NSW7 305 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 REEP3Q6NUK4 255 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 C3orf33Q6P1S2 294 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 PLEKHM3Q6ZWE6 761 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 SERPINA11Q86U17 422 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 COMTD1Q86VU5 262 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 KRT73Q86Y46 540 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 LILRA2Q8N149 483 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 CLIP4Q8N3C7 705 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 CADM2Q8N3J6 435 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 METTL25Q8N6Q8 603 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 RELL2Q8NC24 303 aaPredicted RBP9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 C11orf65Q8NCR3 313 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 HIPK4Q8NE63 616 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 OR10D3Q8NH80 312 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 MBD3L2Q8NHZ7 208 aaPredicted RBP9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 RP9Q8TA86 221 aaKnown RBP9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 ZPLD1Q8TCW7 415 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 ST8SIA1Q92185 356 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 FIG4Q92562 907 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 MRGPRX4Q96LA9 322 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 UCK2Q9BZX2 261 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 MYLK2Q9H1R3 596 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 TMEM38AQ9H6F2 299 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 KAT8Q9H7Z6 458 aaKnown RBP9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 COQ10BQ9H8M1 238 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 NANOGQ9H9S0 305 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 BCL2L10Q9HD36 194 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 EXOSC3Q9NQT5 275 aaKnown RBP9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 CHCHD3Q9NX63 227 aaKnown RBP9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 GMPR2Q9P2T1 348 aaKnown RBP9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 ARL2BPQ9Y2Y0 163 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 CHST2Q9Y4C5 530 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 GMEB1Q9Y692 573 aa9.25□□□□□ -0.93
TSPAN9-202ENST00000407263 A0A0J9YW62 118 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 CFAP73A6NFT4 308 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 CD8B2A6NJW9 211 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 CCT8L1PA6NM43 557 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 C19orf84I3L1E1 186 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 LINC01387J3KSC0 135 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 EFNA2O43921 213 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 NTN1O95631 604 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 IL2RAP01589 272 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 HOXD4P09016 255 aaPredicted RBP9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 TMIGD3P0DMS9 266 aaPredicted RBP9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 GP1BBP13224 206 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 PRG2P13727 222 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 ETS2P15036 469 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 BMP5P22003 454 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 HTR1EP28566 365 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 SLC7A1P30825 629 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 PCGF2P35227 344 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 RAC1P63000 192 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 SIRPAP78324 504 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 HOXC5Q00444 222 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 FOXF2Q12947 444 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 SF3B4Q15427 424 aaKnown RBP eCLIP9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 BCL2A1Q16548 175 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 SLC25A53Q5H9E4 307 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 PRAMEF8Q5VWM4 474 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 PRAMEF7Q5VXH5 474 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 HBMQ6B0K9 141 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 XKRXQ6PP77 449 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 NET1Q7Z628 596 aaPredicted RBP9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 LIX1LQ8IVB5 337 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 SMYD1Q8NB12 490 aa9.24□□□□□ -0.93
TSPAN9-202ENST00000407263 OR8J3Q8NGG0 315 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms