RNA–Protein interactions for RNA: ENST00000398367.1

UBASH3A-203, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best) BASIC

Gene UBASH3A, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-203ENST00000398367 IMMP1LQ96LU5 166 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 TSSK6Q9BXA6 273 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 CCDC90BQ9GZT6 254 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 MMP25Q9NPA2 562 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 C20orf141Q9NUB4 165 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 TVP23BQ9NYZ1 205 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 PSORS1C1Q9UIG5 152 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 ICAM5Q9UMF0 924 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 EFCAB9A8MZ26 197 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 OIP5O43482 229 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 SAGP10523 405 aaPredicted RBP13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 PGCP20142 388 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 MAKP20794 623 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 SLC1A3P43003 542 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 CLDN6P56747 220 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 MVKQ03426 396 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 CBFBQ13951 182 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 OCLNQ16625 522 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 DESI1Q6ICB0 168 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 NDUFAF7Q7L592 441 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 CYP4Z2PQ8N1L4 340 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 FAM26EQ8N5C1 309 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 OR2T33Q8NG76 320 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 OR8D4Q8NGM9 314 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 OR5W2Q8NH69 310 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 ZNF563Q8TA94 476 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 THAP3Q8WTV1 239 aaPredicted RBP13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 CT55Q8WUE5 264 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 HGDQ93099 445 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 HHATLQ9HCP6 504 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 MEPEQ9NQ76 525 aaPredicted RBP13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 MED17Q9NVC6 651 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 FKBP14Q9NWM8 211 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 CNOT2Q9NZN8 540 aaKnown RBP13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 ERVK-18Q9QC07 812 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 TCFL5Q9UL49 500 aa13.39□□□□□ -0.27
UBASH3A-203ENST00000398367 GPR179Q6PRD1 2367 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 NSG1A0A0A6YYJ2 146 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 PMS2P1A4D2B8 440 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 EFCAB10A6NFE3 127 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 ELOA3DA6NLF2 546 aaPredicted RBP13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 M0R129 80 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 HCN1O60741 890 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 DKK1O94907 266 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 HMGN1P05114 100 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 BMP7P18075 431 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 TCN2P20062 427 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 P2RX1P51575 399 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 FBXW4P57775 412 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 RPS15P62841 145 aaKnown RBP13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 SSPNQ14714 243 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 NEDD8Q15843 81 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 SNAPC1Q16533 368 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 ELOA3BQ3SY89 546 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 FAM69BQ5VUD6 431 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 XAF1Q6GPH4 301 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 ACSM5Q6NUN0 579 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 AHSA2Q719I0 299 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 TIPARPQ7Z3E1 657 aaKnown RBP13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 ATG4DQ86TL0 474 aaPredicted RBP13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 TCEANCQ8N8B7 351 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 ELOA3Q8NG57 546 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 OR11G2Q8NGC1 345 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 RNF138Q8WVD3 245 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 SGCDQ92629 289 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 IL4I1Q96RQ9 567 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 COPS4Q9BT78 406 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 TMEM43Q9BTV4 400 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 RBM38Q9H0Z9 239 aaKnown RBP13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 OR52D1Q9H346 318 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 ATP13A2Q9NQ11 1180 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 VPS13AQ96RL7 3174 aa13.38□□□□□ -0.27
UBASH3A-203ENST00000398367 SNTNA6NMZ2 147 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 C21orf140B9A014 251 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 SOCS6O14544 535 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 SCO2O43819 266 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 CDC40O60508 579 aaKnown RBP eCLIP13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 OR2J2O76002 312 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 FBXO45P0C2W1 286 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 PIPP12273 146 aaPredicted RBP13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 PTNP21246 168 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 SLC9A3P48764 834 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 SUMO3P55854 103 aaPredicted RBP13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 EFNB1P98172 346 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 CRYZQ08257 329 aaKnown RBP13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 PMS2P3Q13401 168 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 TUBA3CQ13748 450 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 TMEM44Q2T9K0 475 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 PGGHGQ32M88 737 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 C3orf38Q5JPI3 329 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 CLEC12AQ5QGZ9 265 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 SMARCD3Q6STE5 483 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 C16orf47Q6ZP98 133 aaPredicted RBP13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 CACTIN-AS1Q8N1I8 211 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 B4GALNT2Q8NHY0 566 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 TMEM163Q8TC26 289 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 GGHQ92820 318 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 SGTBQ96EQ0 304 aa13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 SH3YL1Q96HL8 342 aaPredicted RBP13.37□□□□□ -0.27
UBASH3A-203ENST00000398367 SIGLEC11Q96RL6 698 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms