RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 ASB6Q9NWX5 421 aa15.05■□□□□ -0
PTPRN2-201ENST00000389413 SAGE1Q9NXZ1 904 aa15.05■□□□□ -0
PTPRN2-201ENST00000389413 ZNF337Q9Y3M9 751 aa15.05■□□□□ -0
PTPRN2-201ENST00000389413 LRIT2A6NDA9 550 aa15.05■□□□□ -0
PTPRN2-201ENST00000389413 H0YGG7 62 aa15.05■□□□□ -0
PTPRN2-201ENST00000389413 ARF3P61204 181 aaPredicted RBP15.05■□□□□ -0
PTPRN2-201ENST00000389413 SLC14A1Q13336 389 aa15.05■□□□□ -0
PTPRN2-201ENST00000389413 KIAA0040Q15053 153 aa15.05■□□□□ -0
PTPRN2-201ENST00000389413 RPL22L1Q6P5R6 122 aaKnown RBP15.05■□□□□ -0
PTPRN2-201ENST00000389413 WASH2PQ6VEQ5 465 aa15.05■□□□□ -0
PTPRN2-201ENST00000389413 ANKRD31Q8N7Z5 1873 aa15.05■□□□□ -0
PTPRN2-201ENST00000389413 BRIX1Q8TDN6 353 aaKnown RBP15.05■□□□□ -0
PTPRN2-201ENST00000389413 PNPLA2Q96AD5 504 aa15.05■□□□□ -0
PTPRN2-201ENST00000389413 FBXO9Q9UK97 447 aaPredicted RBP15.05■□□□□ -0
PTPRN2-201ENST00000389413 TTC3P53804 2025 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 FER1L6Q2WGJ9 1857 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 ARPC1BO15143 372 aaKnown RBP15.04■□□□□ -0
PTPRN2-201ENST00000389413 GPRIN2O60269 458 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 HOXC8P31273 242 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 GARNL3Q5VVW2 1013 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 MTFR2Q6P444 385 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 FAM111BQ6SJ93 734 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 RNF165Q6ZSG1 346 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 SIMC1Q8NDZ2 872 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 SLC25A46Q96AG3 418 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 BMFQ96LC9 184 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 ZNF350Q9GZX5 532 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 PCDH10Q9P2E7 1040 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 CPNE7Q9UBL6 633 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 MED16Q9Y2X0 877 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 COL11A2P13942 1736 aaPredicted RBP15.04■□□□□ -0
PTPRN2-201ENST00000389413 SOCS6O14544 535 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 DPTQ07507 201 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 PYCR3Q53H96 274 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 ZNF322Q6U7Q0 402 aaPredicted RBP15.04■□□□□ -0
PTPRN2-201ENST00000389413 TECPR1Q7Z6L1 1165 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 OR5T3Q8NGG3 340 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 SYNPRQ8TBG9 265 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 TMEM255BQ8WV15 326 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 ELMOD3Q96FG2 381 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 CPNE2Q96FN4 548 aaPredicted RBP15.04■□□□□ -0
PTPRN2-201ENST00000389413 LMF2Q9BU23 707 aaKnown RBP15.04■□□□□ -0
PTPRN2-201ENST00000389413 GSKIPQ9P0R6 139 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 C17orf105B2RV13 164 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 AMY2AP04746 511 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 UQCRC1P31930 480 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 SLC6A8P48029 635 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 PDX1P52945 283 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 MCATQ8IVS2 390 aaKnown RBP15.04■□□□□ -0
PTPRN2-201ENST00000389413 PHOSPHO2Q8TCD6 241 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 FAM46BQ96A09 425 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 LMF1Q96S06 567 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 DOK1Q99704 481 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 PRAMEF26H0Y7S4 382 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 SYPP08247 313 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 UBL4AP11441 157 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 SHC1P29353 583 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 SOX9P48436 509 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 CTBP2P56545 445 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 TCTN3Q6NUS6 607 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 C8orf82Q6P1X6 216 aaPredicted RBP15.04■□□□□ -0
PTPRN2-201ENST00000389413 COMMD7Q86VX2 200 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 THAP3Q8WTV1 239 aaPredicted RBP15.04■□□□□ -0
PTPRN2-201ENST00000389413 TM9SF4Q92544 642 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 TBC1D20Q96BZ9 403 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 CDCA3Q99618 268 aaPredicted RBP15.04■□□□□ -0
PTPRN2-201ENST00000389413 SLC6A7Q99884 636 aa15.04■□□□□ -0
PTPRN2-201ENST00000389413 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.04■□□□□ -0
PTPRN2-201ENST00000389413 COL4A5P29400 1685 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 HOXC11O43248 304 aaPredicted RBP15.03■□□□□ -0
PTPRN2-201ENST00000389413 DUX1O43812 170 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 IGFBP1P08833 259 aaPredicted RBP15.03■□□□□ -0
PTPRN2-201ENST00000389413 FBXO45P0C2W1 286 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 TCEAL6Q6IPX3 200 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 MFSD12Q6NUT3 480 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 GDPD3Q7L5L3 318 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 PDZD9Q8IXQ8 264 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 SYT4Q9H2B2 425 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 NEU3Q9UQ49 428 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 WASHC1A8K0Z3 465 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 SC5DO75845 299 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 MT-ND4P03905 459 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 KLK3P07288 261 aaPredicted RBP15.03■□□□□ -0
PTPRN2-201ENST00000389413 HOXA9P31269 272 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 NKX3-2P78367 333 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 EFR3AQ14156 821 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 FAM205BPQ63HN1 556 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 FBXO46Q6PJ61 603 aaPredicted RBP15.03■□□□□ -0
PTPRN2-201ENST00000389413 SLC16A11Q8NCK7 471 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 URM1Q9BTM9 101 aaKnown RBP15.03■□□□□ -0
PTPRN2-201ENST00000389413 UBQLN3Q9H347 655 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 THAP10Q9P2Z0 257 aaPredicted RBP15.03■□□□□ -0
PTPRN2-201ENST00000389413 ARRDC5A6NEK1 342 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 DRD1P21728 446 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 PHF19Q5T6S3 580 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 ELP5Q8TE02 316 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 GHSRQ92847 366 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 NXPE3Q969Y0 559 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 ATAD5Q96QE3 1844 aa15.03■□□□□ -0
PTPRN2-201ENST00000389413 TAF1LQ8IZX4 1826 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms