RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 RLIMQ9NVW2 624 aa13.09□□□□□ -0.31
UBE4B-203ENST00000377153 PRDM4Q9UKN5 801 aa13.09□□□□□ -0.31
UBE4B-203ENST00000377153 LRRK2Q5S007 2527 aa13.09□□□□□ -0.31
UBE4B-203ENST00000377153 NCOA6Q14686 2063 aaPredicted RBP13.09□□□□□ -0.31
UBE4B-203ENST00000377153 MED12Q93074 2177 aa13.08□□□□□ -0.31
UBE4B-203ENST00000377153 CLCA1A8K7I4 914 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 FAAHO00519 579 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 DNAJA2O60884 412 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 BCAS1O75363 584 aaPredicted RBP13.08□□□□□ -0.32
UBE4B-203ENST00000377153 EPPINO95925 133 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 IFNA14P01570 189 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 IL2RAP01589 272 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 CPA2P48052 419 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 IDH2P48735 452 aaKnown RBP13.08□□□□□ -0.32
UBE4B-203ENST00000377153 SLC7A2P52569 658 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 NUP107P57740 925 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 RGS8P57771 180 aaPredicted RBP13.08□□□□□ -0.32
UBE4B-203ENST00000377153 PMPCAQ10713 525 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 EPS8Q12929 822 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 VEZF1Q14119 521 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 TOMM34Q15785 309 aaPredicted RBP13.08□□□□□ -0.32
UBE4B-203ENST00000377153 SLC25A53Q5H9E4 307 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 NSUN5P2Q63ZY6 315 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 PPP4R4Q6NUP7 873 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 POMZP3Q6PJE2 187 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 DHRS4L2Q6PKH6 230 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 P4HA3Q7Z4N8 544 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 MRGPRGQ86SM5 289 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 CADM2Q8N3J6 435 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 TNIP2Q8NFZ5 429 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 CA5BP1Q8WTZ4 195 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 ASB5Q8WWX0 329 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 KLHL15Q96M94 604 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 TM9SF2Q99805 663 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 TUBA1CQ9BQE3 449 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 PINK1Q9BXM7 581 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 ALG2Q9H553 416 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 CALHM2Q9HA72 323 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 TIGARQ9NQ88 270 aa13.08□□□□□ -0.32
UBE4B-203ENST00000377153 ELOVL7A1L3X0 281 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 CD8B2A6NJW9 211 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 SLC22A20A6NK97 555 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 CCT8L1PA6NM43 557 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 HSPB2A8KAH6 182 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 ETV2O00321 342 aaPredicted RBP13.07□□□□□ -0.32
UBE4B-203ENST00000377153 AP3D1O14617 1153 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 GSTA4O15217 222 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 GLI4P10075 376 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 AGAP20933 346 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 PSMA4P25789 261 aaKnown RBP13.07□□□□□ -0.32
UBE4B-203ENST00000377153 CHRNB4P30926 498 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 SFTPDP35247 375 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 APOBEC1P41238 236 aaKnown RBP13.07□□□□□ -0.32
UBE4B-203ENST00000377153 EIF1AXP47813 144 aaKnown RBP13.07□□□□□ -0.32
UBE4B-203ENST00000377153 POLR2HP52434 150 aaKnown RBP13.07□□□□□ -0.32
UBE4B-203ENST00000377153 CLDN20P56880 219 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 PCBP3P57721 371 aaKnown RBP13.07□□□□□ -0.32
UBE4B-203ENST00000377153 ADORA2A-AS1P86434 159 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 SRSF1Q07955 248 aaKnown RBP eCLIP13.07□□□□□ -0.32
UBE4B-203ENST00000377153 HSPB2Q16082 182 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 RTL6Q6ICC9 239 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 XKRXQ6PP77 449 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 C16orf89Q6UX73 402 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 NCCRP1Q6ZVX7 275 aaPredicted RBP13.07□□□□□ -0.32
UBE4B-203ENST00000377153 PLEKHM3Q6ZWE6 761 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 RANBP3LQ86VV4 465 aaPredicted RBP13.07□□□□□ -0.32
UBE4B-203ENST00000377153 CALHM3Q86XJ0 350 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 MICU2Q8IYU8 434 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 CLIP4Q8N3C7 705 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 RPRMLQ8N4K4 120 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 MARVELD2Q8N4S9 558 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 ATP6V1C2Q8NEY4 427 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 POC1BQ8TC44 478 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 SDCCAG3Q96C92 435 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 ZNF583Q96ND8 569 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 ZFP3Q96NJ6 502 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 KLHDC3Q9BQ90 382 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 GPATCH1Q9BRR8 931 aaKnown RBP13.07□□□□□ -0.32
UBE4B-203ENST00000377153 ACER3Q9NUN7 267 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 ADA2Q9NZK5 511 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 RPS6KB2Q9UBS0 482 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 TESQ9UGI8 421 aaKnown RBP13.07□□□□□ -0.32
UBE4B-203ENST00000377153 CHRNA9Q9UGM1 479 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 MCTS1Q9ULC4 181 aaKnown RBP13.07□□□□□ -0.32
UBE4B-203ENST00000377153 DOCK7Q96N67 2140 aa13.07□□□□□ -0.32
UBE4B-203ENST00000377153 USP9XQ93008 2570 aaPredicted RBP13.07□□□□□ -0.32
UBE4B-203ENST00000377153 GMNNO75496 209 aa13.06□□□□□ -0.32
UBE4B-203ENST00000377153 SYNGR4O95473 234 aa13.06□□□□□ -0.32
UBE4B-203ENST00000377153 NTN1O95631 604 aa13.06□□□□□ -0.32
UBE4B-203ENST00000377153 OPN1SWP03999 348 aa13.06□□□□□ -0.32
UBE4B-203ENST00000377153 GKN3PP0CG01 181 aa13.06□□□□□ -0.32
UBE4B-203ENST00000377153 TFPIP10646 304 aa13.06□□□□□ -0.32
UBE4B-203ENST00000377153 FKBP2P26885 142 aaKnown RBP13.06□□□□□ -0.32
UBE4B-203ENST00000377153 TIMP3P35625 211 aa13.06□□□□□ -0.32
UBE4B-203ENST00000377153 SLC1A3P43003 542 aa13.06□□□□□ -0.32
UBE4B-203ENST00000377153 CLDN15P56746 228 aa13.06□□□□□ -0.32
UBE4B-203ENST00000377153 PSME3P61289 254 aa13.06□□□□□ -0.32
UBE4B-203ENST00000377153 PLAURQ03405 335 aa13.06□□□□□ -0.32
UBE4B-203ENST00000377153 LIPEQ05469 1076 aa13.06□□□□□ -0.32
UBE4B-203ENST00000377153 KRT72Q14CN4 511 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms