RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 ARSAP15289 507 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 HOXD12P35452 270 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 XCR1P46094 333 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 FASLGP48023 281 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 ALDH3B2P48448 385 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 CAV2P51636 162 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 MLC1Q15049 377 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 Q6ZSR6 202 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 TAS1R1Q7RTX1 841 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 MAVSQ7Z434 540 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 NRARPQ7Z6K4 114 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 VRK2Q86Y07 508 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 MCATQ8IVS2 390 aaKnown RBP10.7□□□□□ -0.7
PTPRF-203ENST00000372407 SYNPRQ8TBG9 265 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 GLYATL2Q8WU03 294 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 RAB40AQ8WXH6 277 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 HRASLS5Q96KN8 279 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 CRB3Q9BUF7 120 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 DNTTIP1Q9H147 329 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 MYEF2Q9P2K5 600 aaKnown RBP10.7□□□□□ -0.7
PTPRF-203ENST00000372407 YARS2Q9Y2Z4 477 aaKnown RBP10.7□□□□□ -0.7
PTPRF-203ENST00000372407 SLC22A7Q9Y694 548 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 LAMB2P55268 1798 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 GJE1A6NN92 205 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 GJB3O75712 270 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 GAAP10253 952 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 ACPPP15309 386 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 ARSBP15848 533 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 SFTPDP35247 375 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 DAPP51397 102 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 CHRNEQ04844 493 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 MEF2DQ14814 521 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 DCUN1D4Q92564 292 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 ISL2Q96A47 359 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 OR2M2Q96R28 347 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 ZNF160Q9HCG1 818 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 PSORS1C1Q9UIG5 152 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 HS3ST2Q9Y278 367 aa10.7□□□□□ -0.7
PTPRF-203ENST00000372407 C1orf196B1AJZ1 125 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 ANKRD28O15084 1053 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 DRD1P21728 446 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 IMPA1P29218 277 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 EMP2P54851 167 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 IRF4Q15306 451 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 KRBOX4Q5JUW0 171 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 AKR1C8PQ5T2L2 129 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 SBSNQ6UWP8 590 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 ZNF852Q6ZMS4 543 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 OR51T1Q8NGJ9 327 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 SLC38A5Q8WUX1 472 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 BTBD2Q9BX70 525 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 MED17Q9NVC6 651 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 PTTG3PQ9NZH4 202 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 EDARQ9UNE0 448 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 TTLL8A6PVC2 850 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 J3KTA2 159 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 CPMP14384 443 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 DLSTP36957 453 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 RPS5P46782 204 aaKnown RBP10.69□□□□□ -0.7
PTPRF-203ENST00000372407 CLDN2P57739 230 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 SEMA3BQ13214 749 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 OR1Q1Q15612 314 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 PGBD5Q8N414 524 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 RCBTB1Q8NDN9 531 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 OR52R1Q8NGF1 315 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 OR5D14Q8NGL3 314 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 UBQLN4Q9NRR5 601 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 ASF1BQ9NVP2 202 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 KLHL13Q9P2N7 655 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 ZNF337Q9Y3M9 751 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 TRAV27A0A087WT01 109 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 A0A1B0GV50 99 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 F5H5K5 113 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 SLC16A6O15403 523 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 SLC16A7O60669 478 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 SDC3O75056 442 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 RAB3AP20336 220 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 LUMP51884 338 aaPredicted RBP10.69□□□□□ -0.7
PTPRF-203ENST00000372407 IL13RA1P78552 427 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 ILKQ13418 452 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 GK2Q14410 553 aaPredicted RBP10.69□□□□□ -0.7
PTPRF-203ENST00000372407 SLCO4C1Q6ZQN7 724 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 ZNF765Q7L2R6 523 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 PRR22Q8IZ63 422 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 CMTM1Q8IZ96 169 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 RNF113BQ8IZP6 322 aaKnown RBP10.69□□□□□ -0.7
PTPRF-203ENST00000372407 SLC7A5P1Q8MH63 180 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 C12orf45Q8N5I9 185 aaPredicted RBP10.69□□□□□ -0.7
PTPRF-203ENST00000372407 FTSJ1Q9UET6 329 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 TESQ9UGI8 421 aaKnown RBP10.69□□□□□ -0.7
PTPRF-203ENST00000372407 VDAC3Q9Y277 283 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 A8MVJ9 347 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 GABRPO00591 440 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 SRPX2O60687 465 aaPredicted RBP10.69□□□□□ -0.7
PTPRF-203ENST00000372407 KCNK5O95279 499 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 GASTP01350 101 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 TP53P04637 393 aaPredicted RBP10.69□□□□□ -0.7
PTPRF-203ENST00000372407 MMP2P08253 660 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 C1SP09871 688 aa10.69□□□□□ -0.7
PTPRF-203ENST00000372407 PSMB5P28074 263 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms