RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 NKX6-3A6NJ46 265 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CT45A6P0DMU7 189 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CT45A5P0DMU8 189 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CT45A7P0DMV0 189 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CT45A8P0DMV1 189 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CT45A9P0DMV2 189 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 SIM1P81133 766 aaPredicted RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 CT45A2Q5DJT8 189 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CT45A1Q5HYN5 189 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 DMBX1Q8NFW5 382 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CT45A3Q8NHU0 189 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CACNA1SQ13698 1873 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 PTNP21246 168 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CRTC1Q6UUV9 634 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CACFD1Q9UGQ2 172 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 SCN5AQ14524 2016 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 LAMA4Q16363 1823 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 SRPX2O60687 465 aaPredicted RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 SNCAP37840 140 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CPNE5Q9HCH3 593 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 KIF13AQ9H1H9 1805 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 SGK494L7N484 410 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 TGM6O95932 706 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 ECI1P42126 302 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 CNIH2Q6PI25 160 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 TCEAL8Q8IYN2 117 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 TCTEX1D2Q8WW35 142 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 PTRH2Q9Y3E5 179 aaKnown RBP9.09□□□□□ -0.95
CUX1-203ENST00000360264 IL1AP01583 271 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 NXPE3Q969Y0 559 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 TOE1Q96GM8 510 aaKnown RBP9.09□□□□□ -0.95
CUX1-203ENST00000360264 KCNJ15Q99712 375 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 A0A1W2PQL4 384 aaPredicted RBP9.09□□□□□ -0.95
CUX1-203ENST00000360264 WTIPA6NIX2 430 aaPredicted RBP9.09□□□□□ -0.95
CUX1-203ENST00000360264 SERPINA7P05543 415 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 SLC10A3P09131 477 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 DIO3P55073 304 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 CCBE1Q6UXH8 406 aaPredicted RBP9.09□□□□□ -0.95
CUX1-203ENST00000360264 SLC43A2Q8N370 569 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 MFSD9Q8NBP5 474 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 OR4K13Q8NH42 304 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 SAMD10Q9BYL1 202 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 GRB7Q14451 532 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 ISCA2Q86U28 154 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 ULBP3Q9BZM4 244 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 RPS10P5Q9NQ39 176 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 PTTG3PQ9NZH4 202 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 RGPD1P0DJD0 1748 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 TMEM269A0A1B0GVZ9 245 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 SDHDO14521 159 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 ITGB2P05107 769 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 GNB3P16520 340 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 FUT1P19526 365 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 DCST2Q5T1A1 773 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 CFAP77Q6ZQR2 320 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 SULF2Q8IWU5 870 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 OR5T1Q8NG75 326 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 OR5D16Q8NGK9 328 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 SAMD8Q96LT4 415 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 FCRL3Q96P31 734 aaPredicted RBP9.09□□□□□ -0.95
CUX1-203ENST00000360264 MRPS21P82921 87 aaKnown RBP9.09□□□□□ -0.95
CUX1-203ENST00000360264 TXNRD3NBQ6F5E7 133 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 RBMS3Q6XE24 437 aaKnown RBP9.09□□□□□ -0.95
CUX1-203ENST00000360264 RNF113BQ8IZP6 322 aaKnown RBP9.09□□□□□ -0.95
CUX1-203ENST00000360264 ANTXRLA6NF34 631 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 HLCSP50747 726 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 FAM74A1Q5RGS3 127 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 PRR18Q8N4B5 295 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 CACNG2Q9Y698 323 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 AQP2P41181 271 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 SLC35A1P78382 337 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 RAB40BQ12829 278 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 NKPD1Q17RQ9 610 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 ZNF648Q5T619 568 aaPredicted RBP9.09□□□□□ -0.95
CUX1-203ENST00000360264 TMEM236Q5W0B7 351 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 PM20D1Q6GTS8 502 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 TCTN2Q96GX1 697 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 FEVQ99581 238 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 SLC38A1Q9H2H9 487 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 ARMC1Q9NVT9 282 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 F5H5P2 479 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 SLC43A1O75387 559 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 SNAPINO95295 136 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 CNR2P34972 360 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 VASPP50552 380 aaPredicted RBP9.09□□□□□ -0.95
CUX1-203ENST00000360264 HNRNPA1L2Q32P51 320 aaKnown RBP9.09□□□□□ -0.95
CUX1-203ENST00000360264 HSF5Q4G112 596 aaPredicted RBP9.09□□□□□ -0.95
CUX1-203ENST00000360264 SYNPRQ8TBG9 265 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 LIN7BQ9HAP6 207 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 MED17Q9NVC6 651 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 ENPP5Q9UJA9 477 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 TRAPPC2LQ9UL33 140 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 HAS2Q92819 552 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 RSPRY1Q96DX4 576 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 M0QZQ0 153 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 GPR39O43194 453 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 LAMP1P11279 417 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 LGALS4P56470 323 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 CPZQ66K79 652 aa9.09□□□□□ -0.95
CUX1-203ENST00000360264 FAM180BQ6P0A1 224 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms