RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 SLC22A12Q96S37 553 aa10.09□□□□□ -0.79
SND1-201ENST00000354725 SLC46A2Q9BY10 475 aa10.09□□□□□ -0.79
SND1-201ENST00000354725 DUSP15Q9H1R2 295 aaPredicted RBP10.09□□□□□ -0.79
SND1-201ENST00000354725 ASB8Q9H765 288 aa10.09□□□□□ -0.79
SND1-201ENST00000354725 FZD3Q9NPG1 666 aa10.09□□□□□ -0.79
SND1-201ENST00000354725 THSD1Q9NS62 852 aa10.09□□□□□ -0.79
SND1-201ENST00000354725 ZNF226Q9NYT6 803 aa10.09□□□□□ -0.79
SND1-201ENST00000354725 MMACHCQ9Y4U1 282 aa10.09□□□□□ -0.79
SND1-201ENST00000354725 RNF215Q9Y6U7 377 aa10.09□□□□□ -0.79
SND1-201ENST00000354725 MYO9BQ13459 2157 aa10.09□□□□□ -0.79
SND1-201ENST00000354725 ARRDC5A6NEK1 342 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 OR2AT4A6NND4 320 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 CLCA1A8K7I4 914 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 C2CD4DB7Z1M9 353 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 D6RAR5 112 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 INMT-MINDY4F8WBC2 141 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 KIAA0513O60268 411 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 C8GP07360 202 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 ANXA5P08758 320 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 OR56A5P0C7T3 313 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 ENGP17813 658 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 PTNP21246 168 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 NSG1P42857 185 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 CRATP43155 626 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 LUMP51884 338 aaPredicted RBP10.08□□□□□ -0.8
SND1-201ENST00000354725 HMGA2P52926 109 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.08□□□□□ -0.8
SND1-201ENST00000354725 RNF130Q86XS8 419 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 OR14A16Q8NHC5 309 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 MAFIPQ8WZ33 124 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 GGHQ92820 318 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 H2AFJQ9BTM1 129 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 KATNB1Q9BVA0 655 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 PHF7Q9BWX1 381 aaPredicted RBP10.08□□□□□ -0.8
SND1-201ENST00000354725 DUSP22Q9NRW4 184 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 NDOR1Q9UHB4 597 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 EXO1Q9UQ84 846 aaKnown RBP10.08□□□□□ -0.8
SND1-201ENST00000354725 DSPPQ9NZW4 1301 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.08□□□□□ -0.8
SND1-201ENST00000354725 C2orf78A6NCI8 922 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 ZNF10P21506 573 aaPredicted RBP10.08□□□□□ -0.8
SND1-201ENST00000354725 KIR3DL1P43629 444 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 MC2RQ01718 297 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 RNF151Q2KHN1 245 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 PTCRAQ6ISU1 281 aaPredicted RBP10.08□□□□□ -0.8
SND1-201ENST00000354725 SHISA2Q6UWI4 295 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 USP30Q70CQ3 517 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 GPR26Q8NDV2 337 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 FGF13Q92913 245 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 TNFRSF14Q92956 283 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 HGDQ93099 445 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 CDCA4Q9BXL8 241 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 RYDENQ9NUL5 291 aaKnown RBP10.08□□□□□ -0.8
SND1-201ENST00000354725 STUB1Q9UNE7 303 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 FCF1Q9Y324 198 aaKnown RBP10.08□□□□□ -0.8
SND1-201ENST00000354725 LRRK1Q38SD2 2015 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 TRAV34A0A0B4J273 112 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 CLDN7O95471 211 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 LAMP2P13473 410 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 RHCEP18577 417 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 NUTF2P61970 127 aaKnown RBP10.08□□□□□ -0.8
SND1-201ENST00000354725 SLC7A9P82251 487 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 DMWDQ09019 674 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 CDH18Q13634 790 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 HTR4Q13639 388 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 CEBPEQ15744 281 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 SNAPC1Q16533 368 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 EXOC3L2Q2M3D2 409 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 ATP13A5Q4VNC0 1218 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 TMEM107Q6UX40 140 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 OR11H7Q8NGC8 314 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 COQ8AQ8NI60 647 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 BTN2A2Q8WVV5 523 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 APOBEC4Q8WW27 367 aaKnown RBP10.08□□□□□ -0.8
SND1-201ENST00000354725 ZCCHC14Q8WYQ9 949 aaKnown RBP10.08□□□□□ -0.8
SND1-201ENST00000354725 MYOCQ99972 504 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 GKN1Q9NS71 199 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 SLCO1C1Q9NYB5 712 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 ZDHHC3Q9NYG2 299 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 C5AR2Q9P296 337 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 NCKAP1Q9Y2A7 1128 aa10.08□□□□□ -0.8
SND1-201ENST00000354725 WDFY4Q6ZS81 3184 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 AHRRA9YTQ3 701 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 FAM20BO75063 409 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 DGKEP52429 567 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 CTSCP53634 463 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 RAB5BP61020 215 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 TEAD2Q15562 447 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 SPDYE7PQ495Y7 208 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 ZNF658BQ4V348 819 aaPredicted RBP10.07□□□□□ -0.8
SND1-201ENST00000354725 KLHL22Q53GT1 634 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 FRG2Q64ET8 278 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 BBS1Q8NFJ9 593 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 STK35Q8TDR2 534 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 ZDHHC1Q8WTX9 485 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 CCDC74AQ96AQ1 378 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 S100PBPQ96BU1 408 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 FRG2BQ96QU4 278 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 ZNF559Q9BR84 538 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 PLA2G2FQ9BZM2 168 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms