RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 KIF18BQ86Y91 864 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 OR5M3Q8NGP4 307 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 OR5W2Q8NH69 310 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 APH1BQ8WW43 257 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 TRUB1Q8WWH5 349 aaKnown RBP17.07■□□□□ 0.32
PTN-201ENST00000348225 UBE2FQ969M7 185 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 RASL10BQ96S79 203 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 TEX12Q9BXU0 123 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 RTN4RQ9BZR6 473 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 DSN1Q9H410 356 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 EGLN3Q9H6Z9 239 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 ZNF226Q9NYT6 803 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 CDH10Q9Y6N8 788 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 FAM20BO75063 409 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 WBP4O75554 376 aaKnown RBP17.07■□□□□ 0.32
PTN-201ENST00000348225 HPP00738 406 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 PTNP21246 168 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 ITPKBP27987 946 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 GIPRP48546 466 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 P2RX1P51575 399 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 CDK5Q00535 292 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 RPL13AP3Q6NVV1 102 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 ZNF620Q6ZNG0 422 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 NODALQ96S42 347 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 DPH1Q9BZG8 443 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 SLC19A3Q9BZV2 496 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 C12orf10Q9HB07 376 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 TBC1D23Q9NUY8 699 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 IL20Q9NYY1 176 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 ICAM5Q9UMF0 924 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 HEATR5AQ86XA9 2040 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 WDFY3Q8IZQ1 3526 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 HTR3EA5X5Y0 456 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 ELOA3DA6NLF2 546 aaPredicted RBP17.06■□□□□ 0.32
PTN-201ENST00000348225 EFCAB9A8MZ26 197 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 PROB1E7EW31 1015 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 GABRB1P18505 474 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 CD82P27701 267 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 SLC1A3P43003 542 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 NTRK2Q16620 822 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 ELOA3BQ3SY89 546 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 LYPD8Q6UX82 237 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 ELOA3Q8NG57 546 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 B4GALNT2Q8NHY0 566 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 SPACA9Q96E40 222 aaPredicted RBP17.06■□□□□ 0.32
PTN-201ENST00000348225 VCX3AQ9NNX9 186 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 CCNB1IP1Q9NPC3 277 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 MEPEQ9NQ76 525 aaPredicted RBP17.06■□□□□ 0.32
PTN-201ENST00000348225 C20orf141Q9NUB4 165 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 AASSQ9UDR5 926 aa17.06■□□□□ 0.32
PTN-201ENST00000348225 CDC42EP2O14613 210 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 XPNPEP2O43895 674 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 ITGA10O75578 1167 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 NUDT14O95848 222 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 CELA2AP08217 269 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 SAGP10523 405 aaPredicted RBP17.05■□□□□ 0.32
PTN-201ENST00000348225 MAKP20794 623 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 SNRPGP62308 76 aaKnown RBP17.05■□□□□ 0.32
PTN-201ENST00000348225 GABREP78334 506 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 CRYZQ08257 329 aaKnown RBP17.05■□□□□ 0.32
PTN-201ENST00000348225 C17orf67Q0P5P2 114 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 OPN5Q6U736 354 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 ATG4DQ86TL0 474 aaPredicted RBP17.05■□□□□ 0.32
PTN-201ENST00000348225 RAB43Q86YS6 212 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 DND1Q8IYX4 353 aaKnown RBP17.05■□□□□ 0.32
PTN-201ENST00000348225 IQCF1Q8N6M8 205 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 OR8J1Q8NGP2 316 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 FANK1Q8TC84 345 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 RNF138Q8WVD3 245 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 IPCEF1Q8WWN9 437 aaPredicted RBP17.05■□□□□ 0.32
PTN-201ENST00000348225 Q96MT0 163 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 SLC38A2Q96QD8 506 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 PLA2G12AQ9BZM1 189 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 FAM192AQ9GZU8 254 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 HHATLQ9HCP6 504 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 ATP13A2Q9NQ11 1180 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 PLCXD1Q9NUJ7 323 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 CLN6Q9NWW5 311 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 KLRF1Q9NZS2 232 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 YARS2Q9Y2Z4 477 aaKnown RBP17.05■□□□□ 0.32
PTN-201ENST00000348225 SNX5Q9Y5X3 404 aa17.05■□□□□ 0.32
PTN-201ENST00000348225 EP300Q09472 2414 aaPredicted RBP17.05■□□□□ 0.32
PTN-201ENST00000348225 SH3D21A4FU49 640 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 ENO4A6NNW6 628 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 TP53I11O14683 189 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 RCBTB2O95199 551 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 SUMO3P55854 103 aaPredicted RBP17.04■□□□□ 0.32
PTN-201ENST00000348225 SMN1Q16637 294 aaKnown RBP17.04■□□□□ 0.32
PTN-201ENST00000348225 CCDC103Q8IW40 242 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 ZNF540Q8NDQ6 660 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 OR52L1Q8NGH7 329 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 OR8D4Q8NGM9 314 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 BRIX1Q8TDN6 353 aaKnown RBP17.04■□□□□ 0.32
PTN-201ENST00000348225 DUSP19Q8WTR2 217 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 PHOX2BQ99453 314 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 TMEM43Q9BTV4 400 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 TSSK6Q9BXA6 273 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 POLDIP3Q9BY77 421 aaKnown RBP17.04■□□□□ 0.32
PTN-201ENST00000348225 METTL7AQ9H8H3 244 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 SDHAF3Q9NRP4 125 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms