RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 GRK5P34947 590 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 ATXN7L3Q14CW9 347 aaPredicted RBP13.76□□□□□ -0.21
NUP50-201ENST00000347635 NNATQ16517 81 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 BEST4Q8NFU0 473 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 APH1BQ8WW43 257 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 ADAMTS14Q8WXS8 1223 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 PMEPA1Q969W9 287 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 ARRDC3Q96B67 414 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 ZFYVE21Q9BQ24 234 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 SLC25A18Q9H1K4 315 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 TMEM185BQ9H7F4 350 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 DHDHQ9UQ10 334 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 KCNE1BA0A087WTH5 132 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 C13orf42A0A1B0GVH6 325 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 B4DXG7 233 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 KHNYNO15037 678 aaKnown RBP13.76□□□□□ -0.21
NUP50-201ENST00000347635 CDC40O60508 579 aaKnown RBP eCLIP13.76□□□□□ -0.21
NUP50-201ENST00000347635 CDC123O75794 336 aaPredicted RBP13.76□□□□□ -0.21
NUP50-201ENST00000347635 PRKCAP17252 672 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 TRIM23P36406 574 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 OR3A3P47888 321 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 OR3A2P47893 321 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 FCN2Q15485 313 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 BAK1Q16611 211 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 ZMAT1Q5H9K5 638 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 KCTD9Q7L273 389 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 MRI1Q9BV20 369 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 TREM1Q9NP99 234 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 CER1O95813 267 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 SPARCP09486 303 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 CSF3P09919 207 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 SHC1P29353 583 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 WNT3P56703 355 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 MRPS10P82664 201 aaKnown RBP13.75□□□□□ -0.21
NUP50-201ENST00000347635 LRRC37A5PQ49AS3 106 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 UBE2NLQ5JXB2 153 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 OLIG3Q7RTU3 272 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 NAT6Q93015 286 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 SRRQ9GZT4 340 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 SOCS6O14544 535 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 POU2F2P09086 479 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 TGM4P49221 684 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 FGL1Q08830 312 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 PCGF3Q3KNV8 242 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 CCNJQ5T5M9 372 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 CAMKMTQ7Z624 323 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 SYNPRQ8TBG9 265 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 BRIX1Q8TDN6 353 aaKnown RBP13.75□□□□□ -0.21
NUP50-201ENST00000347635 ORAI3Q9BRQ5 295 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 ANKRD19PQ9H560 264 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 TRAPPC4Q9Y296 219 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 IER3IP1Q9Y5U9 82 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 WASH3PC4AMC7 463 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 ARPC5O15511 151 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 PRKRAO75569 313 aaKnown RBP13.75□□□□□ -0.21
NUP50-201ENST00000347635 AGTR1P30556 359 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 CNOT9Q92600 299 aaKnown RBP13.75□□□□□ -0.21
NUP50-201ENST00000347635 IL21Q9HBE4 155 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 HS3ST3A1Q9Y663 406 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 APOC3P02656 99 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 GP1BBP13224 206 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 ITGA3P26006 1051 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 GFOD2Q3B7J2 385 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 Q6ZNB5 142 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 ZNF101Q8IZC7 436 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 GALNT11Q8NCW6 608 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 OR56B4Q8NH76 319 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 ZFAND1Q8TCF1 268 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 SCGB3A2Q96PL1 93 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 EMC7Q9NPA0 242 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 POT1Q9NUX5 634 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 HPF1Q9NWY4 346 aa13.75□□□□□ -0.21
NUP50-201ENST00000347635 A0A0J9YY10 115 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 NPIPA5E9PKD4 350 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 ACOT7O00154 380 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 PSMB10P40306 273 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 GK2Q14410 553 aaPredicted RBP13.74□□□□□ -0.21
NUP50-201ENST00000347635 C9orf50Q5SZB4 431 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 ZNF584Q8IVC4 421 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 RNF113BQ8IZP6 322 aaKnown RBP13.74□□□□□ -0.21
NUP50-201ENST00000347635 BEST3Q8N1M1 668 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 NPIPA1Q9UND3 350 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 SC5DO75845 299 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 NR2C1P13056 603 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 SCRN3Q0VDG4 424 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 COL9A2Q14055 689 aaPredicted RBP13.74□□□□□ -0.21
NUP50-201ENST00000347635 ACSM5Q6NUN0 579 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 KCTD18Q6PI47 426 aaPredicted RBP13.74□□□□□ -0.21
NUP50-201ENST00000347635 PARM1Q6UWI2 310 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 ZNF440Q8IYI8 595 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 CASTOR1Q8WTX7 329 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 TMEM255BQ8WV15 326 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 MED30Q96HR3 178 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 METTL8Q9H825 291 aaKnown RBP13.74□□□□□ -0.21
NUP50-201ENST00000347635 LTBP1Q14766 1721 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 C11orf98E9PRG8 122 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 F5H5P2 479 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 S1PR1P21453 382 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 PRKAR1BP31321 381 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 RAB11BQ15907 218 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms