RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 PDLIM1O00151 329 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 TACSTD2P09758 323 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 GPC1P35052 558 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 CDH15P55291 814 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 TRIP10Q15642 601 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 KLHL26Q53HC5 615 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 SLC25A53Q5H9E4 307 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 SZRD1Q7Z422 152 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 COX18Q8N8Q8 333 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 ZNF527Q8NB42 609 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 RFWD2Q8NHY2 731 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 GCDHQ92947 438 aaPredicted RBP14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 APH1AQ96BI3 265 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 DNAJA3Q96EY1 480 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 SNX18Q96RF0 628 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 SLC17A5Q9NRA2 495 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 ASB6Q9NWX5 421 aa14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 NOSIPQ9Y314 301 aaKnown RBP14.27□□□□□ -0.13
NECTIN1-202ENST00000340882 PDPK1O15530 556 aa14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 EFNA1P20827 205 aaPredicted RBP14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 GIFP27352 417 aa14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 LCN1P31025 176 aa14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 DIO1P49895 249 aa14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 SNRPD2P62316 118 aaKnown RBP14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 LGALS3BPQ08380 585 aa14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 QPRTQ15274 297 aa14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 TSNAXIP1Q2TAA8 658 aa14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 TEX35Q5T0J7 233 aa14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 SLC46A3Q7Z3Q1 461 aa14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 MTERF4Q7Z6M4 381 aaKnown RBP14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 ZCCHC24Q8N2G6 241 aaKnown RBP14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 CEP70Q8NHQ1 597 aa14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 CDS1Q92903 461 aa14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 MS4A4EQ96PG1 132 aa14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 MYOZ1Q9NP98 299 aaPredicted RBP14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 MALT1Q9UDY8 824 aa14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 SAR1BQ9Y6B6 198 aa14.26□□□□□ -0.13
NECTIN1-202ENST00000340882 SERTM1A2A2V5 107 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 FAM157AC9JC47 383 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 ETV2O00321 342 aaPredicted RBP14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 ALOX5P09917 674 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 SERPINB4P48594 390 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 CHN2P52757 468 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 SUMO3P55854 103 aaPredicted RBP14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 POU6F2P78424 691 aaPredicted RBP14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 DEFA6Q01524 100 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 TIGD2Q4W5G0 525 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 PRR31Q5SQ13 230 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 OR7E24Q6IFN5 339 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 NOXRED1Q6NXP6 359 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 DEF8Q6ZN54 512 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 TMPPEQ6ZT21 453 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 SPATA19Q7Z5L4 167 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 ZNF540Q8NDQ6 660 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 BTBD2Q9BX70 525 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 KCNE3Q9Y6H6 103 aa14.25□□□□□ -0.13
NECTIN1-202ENST00000340882 SERPINF1P36955 418 aa14.24□□□□□ -0.13
NECTIN1-202ENST00000340882 PAFAH1B1P43034 410 aa14.24□□□□□ -0.13
NECTIN1-202ENST00000340882 DVL1P1P54792 670 aaPredicted RBP14.24□□□□□ -0.13
NECTIN1-202ENST00000340882 CCNIQ14094 377 aa14.24□□□□□ -0.13
NECTIN1-202ENST00000340882 PDK3Q15120 406 aa14.24□□□□□ -0.13
NECTIN1-202ENST00000340882 CDC73Q6P1J9 531 aa14.24□□□□□ -0.13
NECTIN1-202ENST00000340882 C3orf33Q6P1S2 294 aa14.24□□□□□ -0.13
NECTIN1-202ENST00000340882 PEG10Q86TG7 708 aaKnown RBP14.24□□□□□ -0.13
NECTIN1-202ENST00000340882 MTDHQ86UE4 582 aaKnown RBP14.24□□□□□ -0.13
NECTIN1-202ENST00000340882 CCDC103Q8IW40 242 aa14.24□□□□□ -0.13
NECTIN1-202ENST00000340882 FAM216AQ8WUB2 273 aa14.24□□□□□ -0.13
NECTIN1-202ENST00000340882 JADE3Q92613 823 aa14.24□□□□□ -0.13
NECTIN1-202ENST00000340882 HPS1Q92902 700 aa14.24□□□□□ -0.13
NECTIN1-202ENST00000340882 ACSS3Q9H6R3 686 aa14.24□□□□□ -0.13
NECTIN1-202ENST00000340882 EMC3Q9P0I2 261 aa14.24□□□□□ -0.13
NECTIN1-202ENST00000340882 IGHV1-18A0A0C4DH31 117 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 NPIPB8E9PQR5 432 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 NPIPB9F8W1W9 429 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 LYNX1G3V0Z9 82 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 GTPBP1O00178 669 aaKnown RBP14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 SULT2B1O00204 365 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 KLF11O14901 512 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 ENO1P06733 434 aaKnown RBP14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 IGFBP1P08833 259 aaPredicted RBP14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 LYNX1P0DP58 116 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 DAOP14920 347 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 PGCP20142 388 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 FRKP42685 505 aaPredicted RBP14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 C2orf54Q08AI8 447 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 ADIPOQQ15848 244 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 THSD4Q6ZMP0 1018 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 TMCO5AQ8N6Q1 288 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 OR5W2Q8NH69 310 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 SLC7A10Q9NS82 523 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 CA10Q9NS85 328 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 SIRT3Q9NTG7 399 aaPredicted RBP14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 TMEM216Q9P0N5 145 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 AMDHD2Q9Y303 409 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 VWFP04275 2813 aa14.23□□□□□ -0.13
NECTIN1-202ENST00000340882 TMPRSS2O15393 492 aa14.22□□□□□ -0.13
NECTIN1-202ENST00000340882 AKAP10O43572 662 aa14.22□□□□□ -0.13
NECTIN1-202ENST00000340882 MRPL33O75394 65 aaKnown RBP14.22□□□□□ -0.13
NECTIN1-202ENST00000340882 HMGN2P05204 90 aaKnown RBP14.22□□□□□ -0.13
NECTIN1-202ENST00000340882 OR4A8P0C604 315 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms