RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 TOMM34Q15785 309 aaPredicted RBP9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ADRM1Q16186 407 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SLC25A53Q5H9E4 307 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RIPPLY2Q5TAB7 128 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 NSUN5P2Q63ZY6 315 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 DHRS4L2Q6PKH6 230 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 XKRXQ6PP77 449 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ESPNLQ6ZVH7 1005 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 NCCRP1Q6ZVX7 275 aaPredicted RBP9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 GRINAQ7Z429 371 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MRGPRGQ86SM5 289 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RPRMLQ8N4K4 120 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ATP6V1C2Q8NEY4 427 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 OR2T12Q8NG77 320 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 POC1BQ8TC44 478 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ASB5Q8WWX0 329 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SLC35B4Q969S0 331 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SDCCAG3Q96C92 435 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 KLHL15Q96M94 604 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 KLHDC3Q9BQ90 382 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TUBA1CQ9BQE3 449 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PINK1Q9BXM7 581 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 EVA1AQ9H8M9 152 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CALHM2Q9HA72 323 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ACER3Q9NUN7 267 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RLIMQ9NVW2 624 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 NDE1Q9NXR1 346 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CACNA1CQ13936 2221 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 INTS1Q8N201 2190 aaKnown RBP9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ELOVL7A1L3X0 281 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 HSPB2A8KAH6 182 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 FAAHO00519 579 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 AP3D1O14617 1153 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 GSTA4O15217 222 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 DNAJA2O60884 412 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SYNGR4O95473 234 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 IFNA14P01570 189 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 OPN1SWP03999 348 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 GKN3PP0CG01 181 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 GLI4P10075 376 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 FCGR2AP12318 317 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 AGAP20933 346 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CHRNB4P30926 498 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 APOBEC1P41238 236 aaKnown RBP9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MNAT1P51948 309 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 POLR2HP52434 150 aaKnown RBP9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CLDN20P56880 219 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PCBP3P57721 371 aaKnown RBP9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RGS8P57771 180 aaPredicted RBP9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 HSPB2Q16082 182 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 FAM91A1Q658Y4 838 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RTL6Q6ICC9 239 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PLEKHM3Q6ZWE6 761 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RANBP3LQ86VV4 465 aaPredicted RBP9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CALHM3Q86XJ0 350 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 LILRA2Q8N149 483 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CADM2Q8N3J6 435 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MARVELD2Q8N4S9 558 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TNIP2Q8NFZ5 429 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 OR2V1Q8NHB1 315 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CA5BP1Q8WTZ4 195 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SLC25A43Q8WUT9 341 aaPredicted RBP9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ITLN2Q8WWU7 325 aaPredicted RBP9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ZFP3Q96NJ6 502 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 NPAS1Q99742 590 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TM9SF2Q99805 663 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 GPATCH1Q9BRR8 931 aaKnown RBP9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PRRG4Q9BZD6 226 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SPAG4Q9NPE6 437 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TIGARQ9NQ88 270 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SELENONQ9NZV5 590 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RPS6KB2Q9UBS0 482 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CHRNA9Q9UGM1 479 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PRDM4Q9UKN5 801 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MCTS1Q9ULC4 181 aaKnown RBP9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 DOPEY2Q9Y3R5 2298 aa9.91□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 FASNP49327 2511 aaKnown RBP9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MBD3L4A6NDZ8 208 aaPredicted RBP9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MBD3L3A6NE82 208 aaPredicted RBP9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MBD3L5A6NJ08 208 aaPredicted RBP9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SLC22A20A6NK97 555 aa9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CCT8L1PA6NM43 557 aa9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 M0QX08 132 aa9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ETV2O00321 342 aaPredicted RBP9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TNFSF11O14788 317 aa9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MFN2O95140 757 aa9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CLDN14O95500 239 aa9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 NTN1O95631 604 aa9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 OPN1LWP04000 364 aa9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TFPIP10646 304 aa9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PSMA4P25789 261 aaKnown RBP9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 FKBP2P26885 142 aaKnown RBP9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TIMP3P35625 211 aa9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CLDN15P56746 228 aa9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PSME3P61289 254 aa9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PLAURQ03405 335 aa9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 VEZF1Q14119 521 aa9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 KRT72Q14CN4 511 aa9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TMEM176BQ3YBM2 270 aaPredicted RBP9.9□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 LRRC23Q53EV4 343 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms