RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 A8MVJ9 347 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 C2orf74A8MZ97 194 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TALDO1P37837 337 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 KHKP50053 298 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CRYZQ08257 329 aaKnown RBP13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 COX10Q12887 443 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 FAM209BQ5JX69 171 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 C22orf42Q6IC83 251 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TCTN3Q6NUS6 607 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZAR1Q86SH2 424 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SMRP1Q8NCR6 262 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 UBE2ZQ9H832 354 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CD8B2A6NJW9 211 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ALOX12BO75342 701 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 GCM2O75603 506 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 RFPL3O75679 317 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 NCR1O76036 304 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TBX6O95947 436 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CD8BP10966 210 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 DRD1P21728 446 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 B2MP61769 119 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 LARS2Q15031 903 aaKnown RBP13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 AGERQ15109 404 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZNHIT3Q15649 155 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 KANSL1Q7Z3B3 1105 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 VN1R4Q7Z5H5 301 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SYT9Q86SS6 491 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SLC22A18ASQ8N1D0 253 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 GPR32P1Q8NGA4 272 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TSLPQ969D9 159 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 MSLNLQ96KJ4 702 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 NPAP1Q9NZP6 1156 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PTGFRNQ9P2B2 879 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PFDN2Q9UHV9 154 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 COLQQ9Y215 455 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SLC6A5Q9Y345 797 aa13.13□□□□□ -0.31
TNFRSF11A-201ENST00000269485 A0A0B4J293 547 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 URADA6NGE7 173 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 M0R082 166 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 HSD3B1P14060 373 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 BCKDHBP21953 392 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 HSD3B2P26439 372 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TGFBR2P37173 567 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 RORCP51449 518 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CRISP1P54107 249 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 HNRNPA0Q13151 305 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 NSDHLQ15738 373 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZIC1Q15915 447 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 BCL2L15Q5TBC7 163 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 MCATQ8IVS2 390 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SLC30A8Q8IWU4 369 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PFN4Q8NHR9 129 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 LINC00052Q96N35 136 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CCDC32Q9BV29 185 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 LMAN2LQ9H0V9 348 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 RANBP3Q9H6Z4 567 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SPTBN4Q9H254 2564 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PRSS44E7EML9 344 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SHOXO15266 292 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SGCEO43556 437 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CLUP10909 449 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PSMA1P25786 263 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CRYBA2P53672 197 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 MICAQ29983 383 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 HSD17B12Q53GQ0 312 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ARHGAP40Q5TG30 622 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SHEQ5VZ18 495 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ACSM5Q6NUN0 579 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 LAS2Q8IYD9 372 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SYNPOQ8N3V7 929 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 GGHQ92820 318 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 C8orf44Q96CB5 159 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 RNF170Q96K19 258 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SDHCQ99643 169 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PLA2G12AQ9BZM1 189 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 EPHX3Q9H6B9 360 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CCDC86Q9H6F5 360 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SRA1Q9HD15 236 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 NANSQ9NR45 359 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PKDREJQ9NTG1 2253 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 C1orf226A1L170 272 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZNF98A6NK75 572 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SLC30A4O14863 429 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SMAD9O15198 467 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CT62P0C5K7 136 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 APEHP13798 732 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CD38P28907 300 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 RPS19P39019 145 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 GCGRP47871 477 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 LRRC56Q8IYG6 542 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ARL14Q8N4G2 192 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SYT14Q8NB59 555 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 BBS1Q8NFJ9 593 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 MGLLQ99685 303 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 LHX9Q9NQ69 397 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ACER3Q9NUN7 267 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 MYEF2Q9P2K5 600 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SSR3Q9UNL2 185 aa13.12□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TRBV5-3A0A0A0MS03 114 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms