RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ARHGAP11BQ3KRB8 267 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 SLC36A3Q495N2 470 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 GPAT3Q53EU6 434 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 EMC4Q5J8M3 183 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 ZNF468Q5VIY5 522 aaPredicted RBP12.12□□□□□ -0.47
SGCA-201ENST00000262018 UGT2A3Q6UWM9 527 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 DGAT2L6Q6ZPD8 337 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 C16orf62Q7Z3J2 963 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 PHC2Q8IXK0 858 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 GALNT12Q8IXK2 581 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 HS3ST5Q8IZT8 346 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 VWA5B2Q8N398 1253 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 SLC5A8Q8N695 610 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 CDRT4Q8N9R6 151 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 PROX1Q92786 737 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 YTHDF1Q9BYJ9 559 aaKnown RBP12.12□□□□□ -0.47
SGCA-201ENST00000262018 REEP1Q9H902 201 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 ADAP2Q9NPF8 381 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 DUSP22Q9NRW4 184 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 PNPLA3Q9NST1 481 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 UBAP1Q9NZ09 502 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 SAMHD1Q9Y3Z3 626 aaKnown RBP12.12□□□□□ -0.47
SGCA-201ENST00000262018 PCDHGB3Q9Y5G1 929 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 A8MVJ9 347 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 H0YAE9 185 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 NME6O75414 186 aaPredicted RBP12.11□□□□□ -0.47
SGCA-201ENST00000262018 SOX30O94993 753 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 IFNW1P05000 195 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 ALOX5P09917 674 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 THRBP10828 461 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 RHCEP18577 417 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 RRM2P31350 389 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 DCAF7P61962 342 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 ADARB1P78563 741 aaKnown RBP12.11□□□□□ -0.47
SGCA-201ENST00000262018 DUSP8Q13202 625 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 GK3PQ14409 553 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 EXOSC7Q15024 291 aaKnown RBP12.11□□□□□ -0.47
SGCA-201ENST00000262018 RFX4Q33E94 735 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 ARHGAP11AQ6P4F7 1023 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 OLIG3Q7RTU3 272 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 WDR53Q7Z5U6 358 aaPredicted RBP12.11□□□□□ -0.47
SGCA-201ENST00000262018 ANKRD37Q7Z713 158 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 LIX1LQ8IVB5 337 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 DHRSXQ8N5I4 330 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 POGLUT1Q8NBL1 392 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 DOK4Q8TEW6 326 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 SLC9A6Q92581 669 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 CDS1Q92903 461 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 RIT1Q92963 219 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 TSLPQ969D9 159 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 RBM18Q96H35 190 aaKnown RBP12.11□□□□□ -0.47
SGCA-201ENST00000262018 CNBD2Q96M20 576 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 DGAT2Q96PD7 388 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 PIP5K1AQ99755 562 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 PINK1Q9BXM7 581 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 MRPS26Q9BYN8 205 aaKnown RBP12.11□□□□□ -0.47
SGCA-201ENST00000262018 CDCP1Q9H5V8 836 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 SMURF2Q9HAU4 748 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 NECTIN3Q9NQS3 549 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 TUBA8Q9NY65 449 aaPredicted RBP12.11□□□□□ -0.47
SGCA-201ENST00000262018 CBLCQ9ULV8 474 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 SH3GLB1Q9Y371 365 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 LYVE1Q9Y5Y7 322 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 U3KQV3 271 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 PHF3Q92576 2039 aaKnown RBP12.11□□□□□ -0.47
SGCA-201ENST00000262018 SYT5O00445 386 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 ARHGEF9O43307 516 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 NKX2-2O95096 273 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 SNAP29O95721 258 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 AK1P00568 194 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 UBTFL6P0CB48 400 aaPredicted RBP12.11□□□□□ -0.47
SGCA-201ENST00000262018 PRKACGP22612 351 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 MYF6P23409 242 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 UQCRC1P31930 480 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 CAPGP40121 348 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 TUBA4AP68366 448 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 CHRNEQ04844 493 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 EXT1Q16394 746 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 CYP27C1Q4G0S4 372 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 FLYWCH1Q4VC44 716 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 AP1ARQ63HQ0 302 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 KRT80Q6KB66 452 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 FRRS1Q6ZNA5 592 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 ALDH16A1Q8IZ83 802 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 OR52R1Q8NGF1 315 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 OR4C15Q8NGM1 316 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 M1APQ8TC57 530 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 SDF2Q99470 211 aa12.11□□□□□ -0.47
SGCA-201ENST00000262018 LMF2Q9BU23 707 aaKnown RBP12.11□□□□□ -0.47
SGCA-201ENST00000262018 TMEFF2Q9UIK5 374 aaPredicted RBP12.11□□□□□ -0.47
SGCA-201ENST00000262018 FAM32AQ9Y421 112 aaKnown RBP12.11□□□□□ -0.47
SGCA-201ENST00000262018 A0A0G2JNJ9 132 aa12.1□□□□□ -0.47
SGCA-201ENST00000262018 NPIPA2E9PIF3 369 aa12.1□□□□□ -0.47
SGCA-201ENST00000262018 NPIPA3F8WFD2 350 aa12.1□□□□□ -0.47
SGCA-201ENST00000262018 TNFRSF11BO00300 401 aa12.1□□□□□ -0.47
SGCA-201ENST00000262018 EPPINO95925 133 aa12.1□□□□□ -0.47
SGCA-201ENST00000262018 LGI1O95970 557 aa12.1□□□□□ -0.47
SGCA-201ENST00000262018 PABPC4LP0CB38 370 aaKnown RBP12.1□□□□□ -0.47
SGCA-201ENST00000262018 RPL5P46777 297 aaKnown RBP12.1□□□□□ -0.47
SGCA-201ENST00000262018 EMDP50402 254 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms