RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 WBP1Q96G27 269 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 HS6ST2Q96MM7 605 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 DERL3Q96Q80 235 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 NUP50Q9UKX7 468 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 WDR45Q9Y484 360 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 TEX51A0A1B0GUA7 166 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 SLC9A3R1O14745 358 aaPredicted RBP11.48□□□□□ -0.57
NUP88-201ENST00000225696 RGS11O94810 467 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 UBL3O95164 117 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 ITGB8P26012 769 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 VIPR2P41587 438 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 EEF1A1P68104 462 aaKnown RBP11.48□□□□□ -0.57
NUP88-201ENST00000225696 BTN3A2P78410 334 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 ID2Q02363 134 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 PLAURQ03405 335 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 HSF2Q03933 536 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 TMEM35AQ53FP2 167 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 CLLU1Q5K131 121 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 FAAP20Q6NZ36 180 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 RTL4Q6ZR62 310 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 BTN2A1Q7KYR7 527 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 CHMP1BQ7LBR1 199 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 TPRA1Q86W33 373 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 FTMTQ8N4E7 242 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 CXorf40AQ8TE69 158 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 OR8D1Q8WZ84 308 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 CD180Q99467 661 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 DDOQ99489 341 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 MRPS30Q9NP92 439 aaKnown RBP11.48□□□□□ -0.57
NUP88-201ENST00000225696 MEPEQ9NQ76 525 aaPredicted RBP11.48□□□□□ -0.57
NUP88-201ENST00000225696 ANKRD10Q9NXR5 420 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 USP36Q9P275 1121 aaKnown RBP11.48□□□□□ -0.57
NUP88-201ENST00000225696 ST6GALNAC2Q9UJ37 374 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 TP53BP1Q12888 1972 aaPredicted RBP11.47□□□□□ -0.57
NUP88-201ENST00000225696 SPTBP11277 2137 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 PRR23D1E9PI22 279 aaPredicted RBP11.47□□□□□ -0.57
NUP88-201ENST00000225696 TRIM77I1YAP6 450 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 RPN2P04844 631 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 ASGR2P07307 311 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 ADH1AP07327 375 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 LINC00271P0C7V0 271 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 PRR23D2P0DMB1 279 aaPredicted RBP11.47□□□□□ -0.57
NUP88-201ENST00000225696 RRASP10301 218 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 CEBPBP17676 345 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 POU3F2P20265 443 aaPredicted RBP11.47□□□□□ -0.57
NUP88-201ENST00000225696 SLC2A5P22732 501 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 HSD17B2P37059 387 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 GDNFP39905 211 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 VEGFCP49767 419 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 RAB28P51157 221 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 RPS11P62280 158 aaKnown RBP eCLIP11.47□□□□□ -0.57
NUP88-201ENST00000225696 OR1Q1Q15612 314 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 TMEM52BQ4KMG9 183 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 TRMT12Q53H54 448 aaKnown RBP11.47□□□□□ -0.57
NUP88-201ENST00000225696 SEZ6L2Q6UXD5 910 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 ADAMTSL4Q6UY14 1074 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 GRASPQ7Z6J2 395 aaPredicted RBP11.47□□□□□ -0.57
NUP88-201ENST00000225696 SERPINA12Q8IW75 414 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 GALNT11Q8NCW6 608 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 TMIEQ8NEW7 156 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 OR2T4Q8NH00 348 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 RPLP0P6Q8NHW5 317 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 LGALS14Q8TCE9 139 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 ZNF296Q8WUU4 475 aaPredicted RBP11.47□□□□□ -0.57
NUP88-201ENST00000225696 TMEM239Q8WW34 195 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 C10orf90Q96M02 699 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 OR14A2Q96R54 314 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 ZNF436Q9C0F3 470 aaPredicted RBP11.47□□□□□ -0.57
NUP88-201ENST00000225696 C20orf85Q9H1P6 137 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 OR10A4Q9H209 315 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 CMC2Q9NRP2 79 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 CA10Q9NS85 328 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 INSL6Q9Y581 213 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 PRR23AA6NEV1 266 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 IMPA2O14732 288 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 PPP1R3DO95685 299 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 TFP02787 698 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 NDUFS1P28331 727 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 ZNF234Q14588 700 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 CEBPEQ15744 281 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 PLPP4Q5VZY2 271 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 CMTM4Q8IZR5 234 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 SLC44A3Q8N4M1 653 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 OR52L1Q8NGH7 329 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 OR52E1Q8NGJ3 308 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 ZNRF4Q8WWF5 429 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 NR4A3Q92570 626 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 DEFB118Q96PH6 123 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 SDF2Q99470 211 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 GFI1Q99684 422 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 PDCD1LG2Q9BQ51 273 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 SEC22CQ9BRL7 303 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 PITHD1Q9GZP4 211 aaPredicted RBP11.47□□□□□ -0.57
NUP88-201ENST00000225696 MTHFD2LQ9H903 347 aaPredicted RBP11.47□□□□□ -0.57
NUP88-201ENST00000225696 UBQLN2Q9UHD9 624 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 RCE1Q9Y256 329 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 SIGLEC7Q9Y286 467 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 ZNF780BQ9Y6R6 833 aa11.47□□□□□ -0.57
NUP88-201ENST00000225696 SPTBN5Q9NRC6 3674 aaKnown RBP11.46□□□□□ -0.57
NUP88-201ENST00000225696 LRRN3E7EW58 273 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms