RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 ITLN2Q8WWU7 325 aaPredicted RBP13.25□□□□□ -0.29
PCOLCE-201ENST00000223061 UTP4Q969X6 686 aaKnown RBP13.25□□□□□ -0.29
PCOLCE-201ENST00000223061 MRGPRX4Q96LA9 322 aa13.25□□□□□ -0.29
PCOLCE-201ENST00000223061 ZNF607Q96SK3 696 aa13.25□□□□□ -0.29
PCOLCE-201ENST00000223061 SPATA9Q9BWV2 254 aa13.25□□□□□ -0.29
PCOLCE-201ENST00000223061 A1L4Q6 167 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 CLCA1A8K7I4 914 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 DNAJA2O60884 412 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 PCGF2P35227 344 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 IDH2P48735 452 aaKnown RBP13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 GZMMP51124 257 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 CLDN15P56746 228 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 MERTKQ12866 999 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 SF3B4Q15427 424 aaKnown RBP eCLIP13.24□□□□□ -0.291e-8■■■■□ 22.7
PCOLCE-201ENST00000223061 SEM1Q6ZVN7 128 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 CHMP1BQ7LBR1 199 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 CALHM3Q86XJ0 350 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 CCDC71Q8IV32 467 aaPredicted RBP13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 LILRA2Q8N149 483 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 ZPLD1Q8TCW7 415 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 TMEM234Q8WY98 164 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 ST8SIA1Q92185 356 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 RND1Q92730 232 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 GPATCH1Q9BRR8 931 aaKnown RBP13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 BTBD10Q9BSF8 475 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 SPATA5L1Q9BVQ7 753 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 ARMC7Q9H6L4 198 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 ARL8BQ9NVJ2 186 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 STOML1Q9UBI4 398 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 USP22Q9UPT9 525 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 CHST2Q9Y4C5 530 aa13.24□□□□□ -0.29
PCOLCE-201ENST00000223061 FREM3P0C091 2139 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 GTF3C1Q12789 2109 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 EIF1AYO14602 144 aaKnown RBP13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 FRS3O43559 492 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 EFNA2O43921 213 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 SERPINB7O75635 380 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 NTN1O95631 604 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 EPPINO95925 133 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 GP1BBP13224 206 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 ADH6P28332 368 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 SFTPDP35247 375 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 EEFSECP57772 596 aaKnown RBP13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 RAC1P63000 192 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 VMACQ2NL98 169 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 NSUN5P2Q63ZY6 315 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 ARPINQ7Z6K5 226 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 GGNQ86UU5 652 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 ARMC8Q8IUR7 673 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 LACC1Q8IV20 430 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 ZNF440Q8IYI8 595 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 SDCCAG3Q96C92 435 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 MMADHCQ9H3L0 296 aaPredicted RBP13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 ACER3Q9NUN7 267 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 CMTM6Q9NX76 183 aa13.23□□□□□ -0.29
PCOLCE-201ENST00000223061 TPST1O60507 370 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 OPN1SWP03999 348 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 PRG2P13727 222 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 UQCRBP14927 111 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 ELK4P28324 431 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 SHC1P29353 583 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 PRKAR1BP31321 381 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 EIF1AXP47813 144 aaKnown RBP13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 MNAT1P51948 309 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 SLC7A2P52569 658 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 PCBP3P57721 371 aaKnown RBP13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 HOXC5Q00444 222 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 EPS8Q12929 822 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 ZSWIM7Q19AV6 140 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 SLC25A53Q5H9E4 307 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 PPP4R4Q6NUP7 873 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 PLEKHM3Q6ZWE6 761 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 GRAMD2AQ8IUY3 354 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 SLC30A8Q8IWU4 369 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 ZNF808Q8N4W9 903 aaPredicted RBP13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 SMYD1Q8NB12 490 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 TNIP2Q8NFZ5 429 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 REXO5Q96IC2 774 aaKnown RBP13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 ZNF845Q96IR2 970 aaPredicted RBP13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 ZNF583Q96ND8 569 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 HOPXQ9BPY8 73 aaPredicted RBP13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 RSPO3Q9BXY4 272 aaPredicted RBP13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 COQ3Q9NZJ6 369 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 GMPR2Q9P2T1 348 aaKnown RBP13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 RNF6Q9Y252 685 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 A0A0G2JNJ9 132 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 PRORSD1PA6NEY8 169 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 CD8B2A6NJW9 211 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 M0QX08 132 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 ETV2O00321 342 aaPredicted RBP13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 TNFSF11O14788 317 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 GCM2O75603 506 aaPredicted RBP13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 TOXO94900 526 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 RPS3AP61247 264 aaKnown RBP13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 SELENBP1Q13228 472 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 SGCBQ16585 318 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 INTS11Q5TA45 600 aaKnown RBP13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 HACD2Q6Y1H2 254 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 ZNF550Q7Z398 422 aa13.22□□□□□ -0.29
PCOLCE-201ENST00000223061 COMTD1Q86VU5 262 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms