RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 IGFN1Q86VF2 1251 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 LSRQ86X29 649 aaPredicted RBP27.28■■□□□ 1.96
PABPN1-201ENST00000216727 IFT27Q9BW83 186 aa27.28■■□□□ 1.96
PABPN1-201ENST00000216727 COL5A1P20908 1838 aaPredicted RBP27.27■■□□□ 1.96
PABPN1-201ENST00000216727 PI4KAP42356 2102 aa27.27■■□□□ 1.96
PABPN1-201ENST00000216727 A0A087WUJ7 227 aa27.27■■□□□ 1.96
PABPN1-201ENST00000216727 PDGFBP01127 241 aaPredicted RBP27.27■■□□□ 1.96
PABPN1-201ENST00000216727 IGHA1P01876 353 aa27.27■■□□□ 1.96
PABPN1-201ENST00000216727 LCN1P31025 176 aa27.27■■□□□ 1.96
PABPN1-201ENST00000216727 CRYBB2P43320 205 aa27.27■■□□□ 1.96
PABPN1-201ENST00000216727 RHBDD2Q6NTF9 364 aa27.27■■□□□ 1.96
PABPN1-201ENST00000216727 FAM181AQ8N9Y4 354 aa27.27■■□□□ 1.96
PABPN1-201ENST00000216727 CCNL2Q96S94 520 aaPredicted RBP27.27■■□□□ 1.96
PABPN1-201ENST00000216727 PHOX2BQ99453 314 aa27.27■■□□□ 1.96
PABPN1-201ENST00000216727 NUDT9Q9BW91 350 aa27.27■■□□□ 1.96
PABPN1-201ENST00000216727 CDADC1Q9BWV3 514 aa27.27■■□□□ 1.96
PABPN1-201ENST00000216727 VN1R1Q9GZP7 353 aa27.27■■□□□ 1.96
PABPN1-201ENST00000216727 EXOSC3Q9NQT5 275 aaKnown RBP27.27■■□□□ 1.96
PABPN1-201ENST00000216727 ICAM5Q9UMF0 924 aa27.27■■□□□ 1.96
PABPN1-201ENST00000216727 TRAV27A0A087WT01 109 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 PRKNO60260 465 aaPredicted RBP27.26■■□□□ 1.95
PABPN1-201ENST00000216727 HPGDP15428 266 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 ACY1Q03154 408 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 CRYZQ08257 329 aaKnown RBP27.26■■□□□ 1.95
PABPN1-201ENST00000216727 HLA-BQ31612 363 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 PLK5Q496M5 336 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 ZNF485Q8NCK3 441 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 OR51A7Q8NH64 312 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 ATXN7L1Q9ULK2 861 aaPredicted RBP27.26■■□□□ 1.95
PABPN1-201ENST00000216727 CPED1A4D0V7 1026 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 BMP4P12644 408 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 ZNF12P17014 697 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 SLC1A3P43003 542 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 ZXDAP98168 799 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 FHL1Q13642 323 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 PERM1Q5SV97 790 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 LIPKQ5VXJ0 399 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 NIPAL3Q6P499 406 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 PLBD1Q6P4A8 553 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 PSD4Q8NDX1 1056 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 PLPP5Q8NEB5 264 aa27.26■■□□□ 1.95
PABPN1-201ENST00000216727 C2orf92A0A1B0GVN3 265 aa27.25■■□□□ 1.95
PABPN1-201ENST00000216727 FAM183AA6NL82 134 aa27.25■■□□□ 1.95
PABPN1-201ENST00000216727 SCDO00767 359 aa27.25■■□□□ 1.95
PABPN1-201ENST00000216727 SOCS6O14544 535 aa27.25■■□□□ 1.95
PABPN1-201ENST00000216727 SIGLEC6O43699 453 aa27.25■■□□□ 1.95
PABPN1-201ENST00000216727 UTS2O95399 124 aa27.25■■□□□ 1.95
PABPN1-201ENST00000216727 EBPQ15125 230 aaKnown RBP27.25■■□□□ 1.95
PABPN1-201ENST00000216727 OR2G6Q5TZ20 316 aa27.25■■□□□ 1.95
PABPN1-201ENST00000216727 SHFQ7M4L6 423 aa27.25■■□□□ 1.95
PABPN1-201ENST00000216727 OR4F15Q8NGB8 312 aa27.25■■□□□ 1.95
PABPN1-201ENST00000216727 EDAQ92838 391 aa27.25■■□□□ 1.95
PABPN1-201ENST00000216727 C3orf49Q96BT1 292 aa27.25■■□□□ 1.95
PABPN1-201ENST00000216727 TGIF2Q9GZN2 237 aa27.25■■□□□ 1.95
PABPN1-201ENST00000216727 MKL2Q9ULH7 1088 aa27.25■■□□□ 1.95
PABPN1-201ENST00000216727 FER1L5A0AVI2 2057 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 TMED1Q13445 227 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 TPBGQ13641 420 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 SLC35F1Q5T1Q4 408 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 ARMC4Q5T2S8 1044 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 PRPF38BQ5VTL8 546 aaKnown RBP27.24■■□□□ 1.95
PABPN1-201ENST00000216727 MEPCEQ7L2J0 689 aaKnown RBP27.24■■□□□ 1.95
PABPN1-201ENST00000216727 RABEPKQ7Z6M1 372 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 OR4D9Q8NGE8 314 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 TM9SF4Q92544 642 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 TNFRSF13CQ96RJ3 184 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 ARHGAP9Q9BRR9 750 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 ZNF649Q9BS31 505 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 SIAEQ9HAT2 523 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 MCCC2Q9HCC0 563 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 J3QRE1 110 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 YKT6O15498 198 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 UBL4AP11441 157 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 SLC6A6P31641 620 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 SKP2Q13309 424 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 CD226Q15762 336 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 INAQ16352 499 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 LAPTM4BQ86VI4 370 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 MAFAQ8NHW3 353 aaPredicted RBP27.24■■□□□ 1.95
PABPN1-201ENST00000216727 PIGKQ92643 395 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 SLC19A3Q9BZV2 496 aa27.24■■□□□ 1.95
PABPN1-201ENST00000216727 SPIN1Q9Y657 262 aaPredicted RBP27.24■■□□□ 1.95
PABPN1-201ENST00000216727 A0A1W2PQM1 296 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 HTR3EA5X5Y0 456 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 TO15178 435 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 PPM1BO75688 479 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 C9orf40Q8IXQ3 194 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 OR1N1Q8NGS0 311 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 GATAD2BQ8WXI9 593 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 SGTBQ96EQ0 304 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 EXOSC4Q9NPD3 245 aaKnown RBP27.23■■□□□ 1.95
PABPN1-201ENST00000216727 TNFRSF10DQ9UBN6 386 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 COPS7AQ9UBW8 275 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 HEATR5AQ86XA9 2040 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 WWP2O00308 870 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 LAMTOR5O43504 91 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 TSPAN19P0C672 248 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 PEPDP12955 493 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 SOX6P35712 828 aa27.23■■□□□ 1.95
PABPN1-201ENST00000216727 SLC9A3P48764 834 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms