RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Unc5dQ8K1S2 956 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 PurgQ8R4E6 350 aaKnown RBP13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Mgat2Q921V5 442 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cmtm8Q9CZR4 173 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Mecp2Q9Z2D6 484 aaKnown RBP13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr1025-ps1A0A140T8K3 312 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Ankdd1aA0A1L1ST07 508 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Tspan15F7BWT7 294 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cd38P56528 304 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Siah1bQ06985 282 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 HykkQ5U5V2 376 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 OmgQ63912 440 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr524Q7TRU0 318 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 CpmQ80V42 443 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Zadh2Q8BGC4 377 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Atg4bQ8BGE6 393 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gpr20Q8BYC4 358 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cnot2Q8C5L3 540 aaKnown RBP13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Snapc5Q8R2K7 98 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Q91V76 315 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 C1galt1Q9JJ06 363 aa13.2□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Vmn1r9A2RST7 299 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Nr1h5E9Q5A6 505 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Ccdc74aE9Q9U8 364 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Vmn1r58G3X9U3 310 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gm20828J3KMI7 228 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 PrkacaP05132 351 aaKnown RBP13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 TyrP11344 533 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cav3P51637 151 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gmeb2P58929 530 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr331Q5NC44 324 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Six4Q61321 775 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 H2-M2Q6W9L1 343 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Derl2Q8BNI4 239 aaKnown RBP13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Aph1bQ8C7N7 257 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Tm6sf2Q8R1J1 378 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Sfxn1Q99JR1 322 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Glo1Q9CPU0 184 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Slc7a11Q9WTR6 502 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Vmn1r10W4VSP8 311 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 FggyA2AJL3 552 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Vmn2r109K7N747 858 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cops3O88543 423 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Irf2P23906 349 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Ranbp3lQ6PDH4 491 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 TpppQ7TQD2 218 aaKnown RBP13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Znf32Q80V23 272 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 B4galt7Q8R087 327 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 NpntQ91V88 561 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Slco1a6Q99J94 670 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Phf6Q9D4J7 364 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Lman2Q9DBH5 358 aaKnown RBP13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Kcnip1Q9JJ57 227 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Ndrg3Q9QYF9 375 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Trpm3Q5F4S9 1721 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gm8797A0A0A6YW67 77 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gabrr3B2RXA8 464 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gm20390E9PZF0 267 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Fgf18O89101 207 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 UbbP0CG49 305 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 UbcP0CG50 734 aaKnown RBP13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Dnajc5P60904 198 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr1045Q7TR80 315 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Fbxw13Q8BI57 466 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Mbtps2Q8CHX6 515 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr52Q8VFL0 319 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cadm3Q99N28 396 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Thsd1Q9JM61 851 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 ChrdQ9Z0E2 948 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Dlgap4B1AZP2 992 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gm4969D3YZT1 566 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gm4181E9Q7X3 184 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Prps1l3G3UXL2 318 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gml2G5E8L7 176 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Lhx3P50481 400 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Entpd6Q3U0P5 455 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Mansc4Q3UU94 337 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Mep1bQ61847 704 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Creb5Q8K1L0 357 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr769Q8K501 312 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Tas1r1Q99PG6 842 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Prps1Q9D7G0 318 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cpne6Q9Z140 557 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 PlpbpQ9Z2Y8 274 aa13.19□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Tcte1A6H639 498 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr557E9Q550 322 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Dnajb3O35723 242 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Hdac3O88895 424 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Klk1b8P07628 261 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Il13P20109 131 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 St3gal3P97325 374 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gm853Q3UNZ2 425 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Ankub1Q3UUE9 192 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 SprQ64105 261 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 BC061237Q6P8I2 184 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gpc2Q8BKV1 579 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Hint3Q9CPS6 165 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Zfp773Q9CZ29 471 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr27Q9EQ90 311 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Rps27aP62983 156 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms