RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Gm7945F6QI24 236 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gm8020F6WLE9 229 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gm21876F6XK35 94 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Rasd1O35626 280 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Rem1O35929 297 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Elovl3O35949 271 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Fabp4P04117 132 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Atxn1P54254 791 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Cdh6P97326 790 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 IhhP97812 411 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Znf865Q3U3I9 1058 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 TceancQ3US16 359 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Obox3Q3UT54 335 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Pdp1Q3UV70 538 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Pnpla1Q3V1D5 599 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Ephx3Q3V1F8 367 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Cdk15Q3V3A1 433 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Zfp280bQ505F4 534 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Rnase11Q5GAM9 192 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Cyp2d40Q6P8N9 338 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Plppr4Q7TME0 766 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 SelenoiQ80TA1 398 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Fmr1nbQ80ZA7 238 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Poldip3Q8BG81 420 aaKnown RBP9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Sirt7Q8BKJ9 402 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Ube3dQ8BX13 368 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Rbm48Q8K2X2 371 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Cbr3Q8K354 277 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Grhl2Q8K5C0 625 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Dppa3Q8QZY3 150 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Zdhhc1Q8R0N9 484 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Oit3Q8R4V5 546 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Yif1aQ91XB7 293 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Dcp1aQ91YD3 602 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 MtapQ9CQ65 283 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Fis1Q9CQ92 152 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 PipoxQ9D826 390 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Cmtm7Q9ESD6 167 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Fut2Q9JL27 347 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Txnrd2Q9JLT4 524 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Sema7aQ9QUR8 664 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Tjp3Q9QXY1 905 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Bpnt1Q9Z0S1 308 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Btaf1E9QAE3 1848 aa9.12□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Zfp811A0A0J9YU71 552 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Pgbd5D3YZI9 523 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Kcnmb3E9Q7U0 239 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Rarres1F6ZIS7 283 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gm11009F7CWA7 138 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 AdaP03958 352 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Apoc1P34928 88 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Tnfsf9P41274 309 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Nkx2-6P43688 289 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 TstP52196 297 aaKnown RBP9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Cntnap5bQ0V8T8 1292 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gpr55Q3UJF0 327 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Tmprss11eQ5S248 423 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Arhgef39Q66JY6 344 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Olfr527Q7TRT9 305 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Q80X32 188 aaKnown RBP9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Sh3bgrl2Q8BG73 107 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 SowahaQ8BLS7 548 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Foxj3Q8BUR3 623 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Lrfn5Q8BXA0 719 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Pafah2Q8VDG7 390 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Ccdc115Q8VE99 180 aaKnown RBP9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Olfr1208Q8VG47 308 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Olfr1226Q8VGM5 310 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Rfpl4aQ8VH31 287 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Tdrd3Q91W18 743 aaKnown RBP9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Mrgprb3Q91ZC1 312 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Tbx19Q99ME7 446 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 SostQ99P68 211 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Cmc1Q9CPZ8 106 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Spg21Q9CQC8 308 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Prps2Q9CS42 318 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Mpped2Q9CZJ0 294 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Kiaa0141Q9DCV6 510 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Sgk3Q9ERE3 496 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Zbp1Q9QY24 411 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gm13762A2ATG2 311 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Olfr1234A2AVK5 314 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gm3594E9Q2A7 267 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Mid1O70583 680 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Surf2P09926 257 aaKnown RBP9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Zfp28P10078 825 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Csf2rb2P26954 878 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Fv1P70213 459 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Apoc2Q05020 97 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Col10a1Q05306 680 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 D17Wsu92eQ3TT38 291 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Zc3hav1Q3UPF5 946 aaKnown RBP9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Fbxw11Q5SRY7 542 aaKnown RBP9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Npy4rQ61041 375 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Olfr374Q7TRY0 313 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Arl6ip6Q8BH07 226 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Mbtps2Q8CHX6 515 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Chchd4Q8VEA4 139 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Olfr395Q8VGR3 312 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 PpifQ99KR7 206 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms