RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Gpr88Q9EPB7 384 aa18.96■□□□□ 0.63
Trim47-201ENSMUST00000021120 BC034090A0A087WP46 1202 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Dcaf4A0A1Y7VNZ0 532 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Gm5938A2AEN9 163 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Olfr1306A2BFL7 312 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 2610001J05RikF2Z3Y9 59 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Susd5G3UW60 619 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Sod1P08228 154 aaKnown RBP18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Ntf3P20181 258 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Tnfsf9P41274 309 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Atxn1P54254 791 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 JupQ02257 745 aaKnown RBP18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 SctQ08535 133 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Wdr75Q3U821 830 aaKnown RBP18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Orm1Q60590 207 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 GnptgQ6S5C2 307 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Slitrk4Q810B8 837 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Slc35f1Q8BGK5 408 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Pou6f2Q8BJI4 691 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Cox10Q8CFY5 443 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Lrrc25Q8K1T1 297 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Padi6Q8K3V4 682 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Paip1Q8VE62 400 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Med30Q9CQI9 178 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Gdf2Q9WV56 428 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 Fer1l4A3KGK3 1992 aa18.95■□□□□ 0.62
Trim47-201ENSMUST00000021120 A0A286YDM2 672 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Zfp995E9Q6M3 437 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Gm17555F6U8B9 371 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Zfp934K7N6H3 473 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Vmn2r93L7N1Z9 857 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Cav3P51637 151 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Tango2P54797 276 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Sf3b6P59708 125 aaKnown RBP18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 NptnP97300 397 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Atf4Q06507 349 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Ctu2Q3U308 514 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 B3gnt6Q3USF0 391 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Pea15Q62048 130 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Zc3hc1Q80YV2 501 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Nceh1Q8BLF1 408 aaKnown RBP18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Cdc123Q8CII2 336 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Nudt21Q9CQF3 227 aaKnown RBP18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Mospd2Q9CWP6 518 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Eef1e1Q9D1M4 174 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Lypd2Q9DD23 127 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 PtprsB0V2N1 1907 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Ascc3E9PZJ8 2198 aaKnown RBP18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Gm13420A0A140LJJ2 248 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Gm572B1ARY8 399 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Gm43720E0CXM8 267 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Gm3149E9PW52 257 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Adam3F8VQ03 822 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Gm8362K7N6Y6 257 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 VipP32648 170 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 GlaP51569 419 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 TstP52196 297 aaKnown RBP18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Poldip3Q8BG81 420 aaKnown RBP18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Q8CF31 99 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Akip1Q9JJR5 212 aa18.94■□□□□ 0.62
Trim47-201ENSMUST00000021120 Myf5P24699 255 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Etv1P41164 477 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Opn1swP51491 346 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Gmeb2P58929 530 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Fbxo40P62932 710 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Ucp2P70406 309 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Pitx2P97474 317 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Meig1Q61845 88 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Glrx5Q80Y14 152 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Abhd16bQ80YU0 474 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Fam124bQ8BLQ0 456 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Q8C0X8 640 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Fbxw19Q8C2W8 466 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Dnajc22Q8CHS2 339 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Etv5Q9CXC9 510 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 HraslsQ9QZU4 167 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Gm21904A8HG57 180 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Olfr549E9Q542 316 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Gm21866J3QMH4 180 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Gtpbp1O08582 668 aaKnown RBP18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Mup3P04939 184 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Tmco2P0C1V4 183 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Gsx2P31316 305 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 B4galnt2Q09199 510 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 AasdhQ80WC9 1100 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Eri3Q8C460 337 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Polr1eQ8K202 482 aaKnown RBP18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Gulp1Q8K2A1 304 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Olfr77Q8VEY9 312 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Snx11Q91WL6 271 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Taldo1Q93092 337 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Abcg5Q99PE8 652 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Trmt5Q9D0C4 501 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Ap3s1Q9DCR2 193 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Stard5Q9EPQ7 213 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 Oc90Q9Z0L3 485 aa18.93■□□□□ 0.62
Trim47-201ENSMUST00000021120 1700028J19RikA0A0U1RP08 172 aa18.92■□□□□ 0.62
Trim47-201ENSMUST00000021120 Gm13723A0A1L1SUP2 315 aa18.92■□□□□ 0.62
Trim47-201ENSMUST00000021120 Cd300cA2A7V7 229 aa18.92■□□□□ 0.62
Trim47-201ENSMUST00000021120 Olfr1164A2AVT5 326 aa18.92■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms