RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Olfr692Q8VF03 329 aa17.45■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 DlstQ9D2G2 454 aa17.45■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Cmpk1Q9DBP5 196 aa17.45■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Slc46a3Q9DC26 460 aa17.45■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Lbx2Q9WUN8 195 aa17.45■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Amd2D3Z6H8 334 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Vmn1r13G5E8I3 300 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Aldh1a7O35945 501 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Evx2P49749 475 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Cmklr1P97468 371 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Coq7P97478 217 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Bbs1Q3V3N7 593 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Katnb1Q8BG40 658 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Gpr158Q8C419 1200 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Scamp1Q8K021 338 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Lyrm4Q8K215 91 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Anapc10Q8K2H6 185 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Taldo1Q93092 337 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Chp2Q9D869 196 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Brix1Q9DCA5 353 aaKnown RBP17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Sertad3Q9ERC3 197 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Dnaja4Q9JMC3 397 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Slc9a6A1L3P4 702 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Alx4O35137 399 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Pmm1O35621 262 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Nme6O88425 189 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 TrhrP21761 393 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 TtkP35761 856 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 HepacamQ640R3 418 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 BocQ6AZB0 1110 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Tvp23aQ6NVH0 222 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Olfr645Q7TRQ1 315 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Olfr70Q80ZX9 316 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Lkaaear1Q8BIG2 198 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Rhbdd3Q8BP97 385 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Slc25a21Q8BZ09 298 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Rdh1Q8CGV4 317 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Klf11Q8K1S5 502 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Mrgpra7Q91ZC5 305 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 LipfQ9CPP7 395 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Gid4Q9CPY6 217 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Elovl4Q9EQC4 312 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Wdr61Q9ERF3 305 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Dnajb8Q9QYI7 227 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Coro1bQ9WUM3 484 aaKnown RBP17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 NcdnQ9Z0E0 729 aa17.44■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Ckap5A2AGT5 2032 aaKnown RBP17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Ptrhd1D3Z4S3 140 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Btbd2E9PUS2 523 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Olfr190K7N5T5 307 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Eef1a1P10126 462 aaKnown RBP17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Pou3f2P31360 445 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Methig1Q76I26 264 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Mrps7Q80X85 242 aaKnown RBP17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Luzp2Q8BGY3 345 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Nyap2Q8BM65 682 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Endod1Q8C522 501 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Kremen2Q8K1S7 461 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Olfr1176Q8VG40 315 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Olfr683Q8VGV1 319 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Pcdhb16Q91Y03 802 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Pebp4Q9D9G2 242 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Olfr294F7CWV4 335 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Alx3O70137 343 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Gja4P28235 333 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Fabp7P51880 132 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Fgf13P70377 245 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Dcst1Q059Y8 732 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Pak6Q3ULB5 682 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Znf770Q8BIQ8 705 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Cpne1Q8C166 536 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Olfr474Q8VFC9 310 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Cstf1Q99LC2 431 aaKnown RBP17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Txndc17Q9CQM5 123 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 4931417E11RikQ9CR05 305 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Pfdn1Q9CWM4 122 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Prdm5Q9CXE0 599 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Lypd6bQ9D7F2 191 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Lman2Q9DBH5 358 aaKnown RBP17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Pkmyt1Q9ESG9 490 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Asic5Q9R0Y1 495 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 NsdhlQ9R1J0 362 aa17.43■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Olfr1315-ps1A0A140LI66 314 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Gm11127A7VMS2 374 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 FkbplO35450 347 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 B3galt2O54905 422 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 P01635 115 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Cdh11P55288 796 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Tbx5P70326 518 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Fgf11P70378 225 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Ube2fbQ3UWQ3 185 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Bcl2a1bQ497M6 172 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Lats1Q8BYR2 1129 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Utp15Q8C7V3 528 aaKnown RBP17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Zfpm2Q8CCH7 1151 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 CipcQ8R0W1 432 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Vmn1r32Q8R2D9 302 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Olfr164Q8VF87 315 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Olfr1316Q8VG12 314 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 TipinQ91WA1 278 aa17.42■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms