RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 GDF15Q99988 308 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 MTHFD2LQ9H903 347 aaPredicted RBP13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 ACOXLQ9NUZ1 547 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 NUP210Q8TEM1 1887 aaPredicted RBP13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 FGF17O60258 216 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 HCN1O60741 890 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 RNGTTO60942 597 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 ADAM11O75078 769 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 CA3P07451 260 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 CT62P0C5K7 136 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 GIFP27352 417 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 CLDN12P56749 244 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 PPP1CAP62136 330 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 FOXK2Q01167 660 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 DUSP6Q16828 381 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 PRRT3Q5FWE3 981 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 SFXN4Q6P4A7 337 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 MEPCEQ7L2J0 689 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 ASPGQ86U10 573 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 YAF2Q8IY57 180 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 CNOT9Q92600 299 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 GHSRQ92847 366 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 HS6ST2Q96MM7 605 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 PDCD1LG2Q9BQ51 273 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 APOOQ9BUR5 198 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 MRPS18AQ9NVS2 196 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 OR6C74A6NCV1 312 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 IDSB3KWA1 339 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 SYT5O00445 386 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 MT-ND4P03905 459 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 SLC35G6P0C7Q6 338 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 CXCL3P19876 107 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 UQCRC1P31930 480 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 DGCR2P98153 550 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 NTRK2Q16620 822 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 LRRC17Q8N6Y2 441 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 SFXN5Q8TD22 340 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 OR1E3Q8WZA6 343 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 RFT1Q96AA3 541 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 RAB7BQ96AH8 199 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 C10orf90Q96M02 699 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 MS4A4EQ96PG1 132 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 GSDMCQ9BYG8 508 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 NT5DC2Q9H857 520 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 BRD7Q9NPI1 651 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 ADAM18Q9Y3Q7 739 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 WDFY3Q8IZQ1 3526 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 IRGMA1A4Y4 181 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 SOX30O94993 753 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 PRKAR1BP31321 381 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 RGS1Q08116 209 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 HYAL4Q2M3T9 481 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 DCST2Q5T1A1 773 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 LAMTOR1Q6IAA8 161 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 ZNF433Q8N7K0 673 aaPredicted RBP13□□□□□ -0.33
CACNA1A-228ENST00000636610 MEPEQ9NQ76 525 aaPredicted RBP13□□□□□ -0.33
CACNA1A-228ENST00000636610 PCDHGB7Q9Y5F8 929 aa13□□□□□ -0.33
CACNA1A-228ENST00000636610 A0A1B0GVT2 93 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 CACNB4O00305 520 aaPredicted RBP12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 HCRTR1O43613 425 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 PRICKLE3O43900 615 aaPredicted RBP12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 HMGN1P05114 100 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 CLDN20P56880 219 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 ERV3-1Q14264 604 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 SF3A2Q15428 464 aaKnown RBP12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 ODF4Q2M2E3 257 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 ACSM3Q53FZ2 586 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 DGAT2L6Q6ZPD8 337 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 RANBP3LQ86VV4 465 aaPredicted RBP12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 GATSQ8NAP1 163 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 MFSD9Q8NBP5 474 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 FAM98AQ8NCA5 519 aaKnown RBP12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 OR52E2Q8NGJ4 325 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 ABHD4Q8TB40 342 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 C1QTNF2Q9BXJ5 285 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 SLC25A18Q9H1K4 315 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 MED28Q9H204 178 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 TRIM36Q9NQ86 728 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 ZMIZ1Q9ULJ6 1067 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 NCKAP1Q9Y2A7 1128 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 TRAPPC13A5PLN9 417 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 DUXAA6NLW8 204 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 ALX3O95076 343 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 IGHA1P01876 353 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 ADRB1P08588 477 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 FAM157BP0CG42 384 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 POU3F3P20264 500 aaPredicted RBP12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 PRMT2P55345 433 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 SFRP4Q6FHJ7 346 aaPredicted RBP12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 ANKRD54Q6NXT1 300 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 MRGPREQ86SM8 312 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 OAFQ86UD1 273 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 SLC44A3Q8N4M1 653 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 OR4C6Q8NH72 309 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 ZFAND1Q8TCF1 268 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 SMPDL3BQ92485 455 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 AKAP1Q92667 903 aaKnown RBP eCLIP12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 SOSTQ9BQB4 213 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 NDC1Q9BTX1 674 aa12.99□□□□□ -0.33
CACNA1A-228ENST00000636610 CALML5Q9NZT1 146 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms