RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 ANKRD36CQ5JPF3 1778 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 LOC105369274A0A096LPK9 316 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 ARL6IP1Q15041 203 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 NKAIN2Q5VXU1 208 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 PRSS48Q7RTY5 328 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 OR4N4Q8N0Y3 316 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 RNF128Q8TEB7 428 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 CNOT9Q92600 299 aaKnown RBP11.03□□□□□ -0.64
SHPRH-211ENST00000629427 SNAPC3Q92966 411 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 ITFG2Q969R8 447 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 TWSG1Q9GZX9 223 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 ZFP57Q9NU63 452 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 ZNF223Q9UK11 482 aaPredicted RBP11.03□□□□□ -0.64
SHPRH-211ENST00000629427 C4BP0C0L5 1744 aa11.02□□□□□ -0.64
SHPRH-211ENST00000629427 MITFO75030 526 aaPredicted RBP11.02□□□□□ -0.64
SHPRH-211ENST00000629427 DNAJB6O75190 326 aa11.02□□□□□ -0.64
SHPRH-211ENST00000629427 UGT2B7P16662 529 aa11.02□□□□□ -0.64
SHPRH-211ENST00000629427 CCL11P51671 97 aa11.02□□□□□ -0.64
SHPRH-211ENST00000629427 P2RY14Q15391 338 aa11.02□□□□□ -0.64
SHPRH-211ENST00000629427 ENTPD8Q5MY95 495 aa11.02□□□□□ -0.64
SHPRH-211ENST00000629427 FAM43BQ6ZT52 329 aaPredicted RBP11.02□□□□□ -0.64
SHPRH-211ENST00000629427 UTP23Q9BRU9 249 aaKnown RBP11.02□□□□□ -0.64
SHPRH-211ENST00000629427 HSBP1L1C9JCN9 74 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 CD79BP40259 229 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 HTR6P50406 440 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 SF3A2Q15428 464 aaKnown RBP11.02□□□□□ -0.65
SHPRH-211ENST00000629427 LCN8Q6JVE9 175 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 TCTN2Q96GX1 697 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF845Q96IR2 970 aaPredicted RBP11.02□□□□□ -0.65
SHPRH-211ENST00000629427 ULBP2Q9BZM5 246 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 ASF1BQ9NVP2 202 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 NDUFAF4Q9P032 175 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 NLKQ9UBE8 527 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 EBF1Q9UH73 591 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 SSX4O60224 188 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 SLC22A5O76082 557 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 ACPPP15309 386 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 RPL23AP62750 156 aaKnown RBP11.02□□□□□ -0.65
SHPRH-211ENST00000629427 CCNJQ5T5M9 372 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 WBP2NLQ6ICG8 309 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 FAM83FQ8NEG4 500 aaPredicted RBP11.02□□□□□ -0.65
SHPRH-211ENST00000629427 BPIFA2Q96DR5 249 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 LMF2Q9BU23 707 aaKnown RBP11.02□□□□□ -0.65
SHPRH-211ENST00000629427 UNKLQ9H9P5 680 aaKnown RBP11.02□□□□□ -0.65
SHPRH-211ENST00000629427 UBQLN4Q9NRR5 601 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 SMOXQ9NWM0 555 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 CA5BQ9Y2D0 317 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 ECM29Q5VYK3 1845 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 BCAS1O75363 584 aaPredicted RBP11.02□□□□□ -0.65
SHPRH-211ENST00000629427 PSMB5P28074 263 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 TSFMP43897 325 aaKnown RBP11.02□□□□□ -0.65
SHPRH-211ENST00000629427 TLDC1Q6P9B6 456 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 MYLIPQ8WY64 445 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 AMDHD1Q96NU7 426 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 PPIL3Q9H2H8 161 aaKnown RBP11.02□□□□□ -0.65
SHPRH-211ENST00000629427 RDH14Q9HBH5 336 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 PRMT8Q9NR22 394 aaPredicted RBP11.02□□□□□ -0.65
SHPRH-211ENST00000629427 MROH6A6NGR9 719 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 A8MXE2 369 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 SLC16A7O60669 478 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 SC5DO75845 299 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 F10P00742 488 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 APOC3P02656 99 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 DCTP40126 519 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 MAT1AQ00266 395 aaKnown RBP11.02□□□□□ -0.65
SHPRH-211ENST00000629427 LCN10Q6JVE6 187 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 DPY19L2P1Q6NXN4 242 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 SCD5Q86SK9 330 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF417Q8TAU3 575 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 FKRPQ9H9S5 495 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 OR6C2Q9NZP2 312 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 SLC6A5Q9Y345 797 aa11.02□□□□□ -0.65
SHPRH-211ENST00000629427 CEBPZOSA8MTT3 80 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 DENRO43583 198 aaKnown RBP11.01□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF254O75437 659 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 PTGER4P35408 488 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 ARHGAP19Q14CB8 494 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 TECPR1Q7Z6L1 1165 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 MICU1Q9BPX6 476 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 CLSTN3Q9BQT9 956 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 C7orf50Q9BRJ6 194 aaKnown RBP11.01□□□□□ -0.65
SHPRH-211ENST00000629427 GABRR3A8MPY1 467 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 SPDEFO95238 335 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 CRHBPP24387 322 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 ALDH3B1P43353 468 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 HOXC5Q00444 222 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 ELP2Q6IA86 826 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 ANKRD54Q6NXT1 300 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 NIPAL3Q6P499 406 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 PDZD9Q8IXQ8 264 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 LIN37Q96GY3 246 aaPredicted RBP11.01□□□□□ -0.65
SHPRH-211ENST00000629427 OR2B2Q9GZK3 357 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 BTNL2Q9UIR0 455 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 ASCC3Q8N3C0 2202 aaKnown RBP11.01□□□□□ -0.65
SHPRH-211ENST00000629427 HMGN2P05204 90 aaKnown RBP11.01□□□□□ -0.65
SHPRH-211ENST00000629427 GAAP10253 952 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 TMEM11P17152 192 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 HTR5AP47898 357 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 RRADP55042 308 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 NFATC4Q14934 902 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms