RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 MSRB3Q8IXL7 192 aa14.57□□□□□ -0.08
LSM4-206ENST00000600289 C9orf106Q8NAJ2 232 aa14.57□□□□□ -0.08
LSM4-206ENST00000600289 OR5M1Q8NGP8 315 aa14.57□□□□□ -0.08
LSM4-206ENST00000600289 ADGRG7Q96K78 797 aa14.57□□□□□ -0.08
LSM4-206ENST00000600289 RNF145Q96MT1 663 aa14.57□□□□□ -0.08
LSM4-206ENST00000600289 SPOCK3Q9BQ16 436 aa14.57□□□□□ -0.08
LSM4-206ENST00000600289 MTHFD2LQ9H903 347 aaPredicted RBP14.57□□□□□ -0.08
LSM4-206ENST00000600289 PAQR5Q9NXK6 330 aaPredicted RBP14.57□□□□□ -0.08
LSM4-206ENST00000600289 SLC25A37Q9NYZ2 338 aa14.57□□□□□ -0.08
LSM4-206ENST00000600289 ZNF175Q9Y473 711 aa14.57□□□□□ -0.08
LSM4-206ENST00000600289 FAM90A27PA6NNH2 459 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 SHISA8B8ZZ34 492 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 CLIC1O00299 241 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 DVL2O14641 736 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 CSTAP01040 98 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 TFPTP0C1Z6 253 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 NR2F1P10589 423 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 ETFAP13804 333 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 PRKCAP17252 672 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 CRATP43155 626 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 SUCLG1P53597 346 aaKnown RBP14.56□□□□□ -0.08
LSM4-206ENST00000600289 CLDN20P56880 219 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 RPS3AP61247 264 aaKnown RBP14.56□□□□□ -0.08
LSM4-206ENST00000600289 FOXF1Q12946 379 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 GNA13Q14344 377 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 RGNQ15493 299 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 FBXL19-AS1Q494R0 122 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 PAGE3Q5JUK9 113 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 PRAMEF8Q5VWM4 474 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 PRAMEF7Q5VXH5 474 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 DPP10Q8N608 796 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 NANOS1Q8WY41 292 aaKnown RBP14.56□□□□□ -0.08
LSM4-206ENST00000600289 ST8SIA1Q92185 356 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 AURKBQ96GD4 344 aaPredicted RBP14.56□□□□□ -0.08
LSM4-206ENST00000600289 MRGPRX4Q96LA9 322 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 NPAS1Q99742 590 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 TRIM8Q9BZR9 551 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.56□□□□□ -0.08
LSM4-206ENST00000600289 LEF1Q9UJU2 399 aaPredicted RBP14.56□□□□□ -0.08
LSM4-206ENST00000600289 PRDM4Q9UKN5 801 aa14.56□□□□□ -0.08
LSM4-206ENST00000600289 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 NKX2-6A6NCS4 301 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 ADAMDEC1O15204 470 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 CRHP06850 196 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 DBIP07108 87 aaKnown RBP14.55□□□□□ -0.08
LSM4-206ENST00000600289 VIMP08670 466 aaKnown RBP14.55□□□□□ -0.08
LSM4-206ENST00000600289 CTSSP25774 331 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 OPRM1P35372 400 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 ARFIP2P53365 341 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 CRISP3P54108 245 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 KCNJ10P78508 379 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 PLAURQ03405 335 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 CTU2Q2VPK5 515 aaKnown RBP14.55□□□□□ -0.08
LSM4-206ENST00000600289 NDUFAF6Q330K2 333 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 OR2A2Q6IF42 318 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 ESPNLQ6ZVH7 1005 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 CHMP1BQ7LBR1 199 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 GRAMD2AQ8IUY3 354 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 UBQLNLQ8IYU4 475 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 TMCO5AQ8N6Q1 288 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 RELL2Q8NC24 303 aaPredicted RBP14.55□□□□□ -0.08
LSM4-206ENST00000600289 SLC38A5Q8WUX1 472 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 ZG16BQ96DA0 208 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 ZNF317Q96PQ6 595 aaPredicted RBP14.55□□□□□ -0.08
LSM4-206ENST00000600289 SFXN3Q9BWM7 321 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 UCK2Q9BZX2 261 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 BCL2L10Q9HD36 194 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 A4GALTQ9NPC4 353 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 NPDC1Q9NQX5 325 aaPredicted RBP14.55□□□□□ -0.08
LSM4-206ENST00000600289 JKAMPQ9P055 326 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 VAPAQ9P0L0 249 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 SLAMF8Q9P0V8 285 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 KLHL14Q9P2G3 628 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 CORO2BQ9UQ03 480 aa14.55□□□□□ -0.08
LSM4-206ENST00000600289 A0A0G2JPF8 293 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 TMEM247A6NEH6 219 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 SLC22A20A6NK97 555 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 HNRNPCL2B2RXH8 293 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 HNRNPCL3B7ZW38 293 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 FAAHO00519 579 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 SEC14L5O43304 696 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 HNRNPCL1O60812 293 aaKnown RBP14.54□□□□□ -0.08
LSM4-206ENST00000600289 NUDT14O95848 222 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 HNRNPCL4P0DMR1 293 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 TMIGD3P0DMS9 266 aaPredicted RBP14.54□□□□□ -0.08
LSM4-206ENST00000600289 NID1P14543 1247 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 CD1EP15812 388 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 PGCP20142 388 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 ME2P23368 584 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 SLC6A8P48029 635 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 ASCL1P50553 236 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 RNF144AP50876 292 aaPredicted RBP14.54□□□□□ -0.08
LSM4-206ENST00000600289 SELENBP1Q13228 472 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 QPRTQ15274 297 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 TOMM34Q15785 309 aaPredicted RBP14.54□□□□□ -0.08
LSM4-206ENST00000600289 ZSWIM7Q19AV6 140 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 DLEU7Q6UYE1 221 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 FBXO27Q8NI29 283 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 WDR60Q8WVS4 1066 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 TMEM234Q8WY98 164 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms