RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	CARM1	Q86X55	608 aa		19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026	PLCZ1	Q86YW0	608 aa		19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026	FAM109A	Q8N4B1	249 aa		19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026	FAM86B1	Q8N7N1	296 aa		19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026	GNRHR2	Q96P88	292 aa		19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026	RSPO3	Q9BXY4	272 aa	Predicted RBP	19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026	EXOSC3	Q9NQT5	275 aa	Known RBP	19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026	AURKC	Q9UQB9	309 aa		19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026	CHST2	Q9Y4C5	530 aa		19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026	NPIPA5	E9PKD4	350 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	PYCARD-AS1	I3L0S3	204 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	EPPIN	O95925	133 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	IFNW1	P05000	195 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	MSX1	P28360	303 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	ZNF117	Q03924	483 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	OR5M10	Q6IEU7	315 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	ADGRG5	Q8IZF4	528 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	FAM71C	Q8NEG0	241 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	TOR1AIP2	Q8NFQ8	470 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	B4GALNT2	Q8NHY0	566 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	VANGL1	Q8TAA9	524 aa	Predicted RBP	19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	CANT1	Q8WVQ1	401 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	SH3YL1	Q96HL8	342 aa	Predicted RBP	19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	UBQLN3	Q9H347	655 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	ZDHHC11	Q9H8X9	412 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	NPIPA1	Q9UND3	350 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	PCNX3	Q9H6A9	2034 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	FREM3	P0C091	2139 aa		19.96	■□□□□ 0.79
LTBP4-227	ENST00000600026	HEATR5A	Q86XA9	2040 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	CFAP46	Q8IYW2	2715 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	ZNF462	Q96JM2	2506 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026		M0R3H8	397 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	WISP2	O76076	250 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	CELA3A	P09093	270 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	RAP2A	P10114	183 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	UQCRB	P14927	111 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	GDF1	P27539	372 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	OR1E2	P47887	323 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	SLC6A8	P48029	635 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	P2RX1	P51575	399 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	CCR4	P51679	360 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	SKP2	Q13309	424 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	NDUFAF6	Q330K2	333 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	CMPK2	Q5EBM0	449 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	RANBP3L	Q86VV4	465 aa	Predicted RBP	19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	FADS6	Q8N9I5	356 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	OR2M3	Q8NG83	312 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	OR4K17	Q8NGC6	315 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	STMN2	Q93045	179 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	MIB2	Q96AX9	1013 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	DTNBP1	Q96EV8	351 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	GPR137	Q96N19	417 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	YY1AP1	Q9H869	796 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	FBXL2	Q9UKC9	423 aa		19.95	■□□□□ 0.78
LTBP4-227	ENST00000600026	IGLV3-32	A0A0A0MS00	114 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	AP3D1	O14617	1153 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	FRS3	O43559	492 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	BCAS1	O75363	584 aa	Predicted RBP	19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	FABP3	P05413	133 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	GKN3P	P0CG01	181 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	ITGA2	P17301	1181 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	TNFRSF1B	P20333	461 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	SLC7A1	P30825	629 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	SUMO3	P55854	103 aa	Predicted RBP	19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	COMTD1	Q86VU5	262 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	OR5W2	Q8NH69	310 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	DUS3L	Q96G46	650 aa	Known RBP	19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	DEFB127	Q9H1M4	99 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	DSN1	Q9H410	356 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	PTGES2	Q9H7Z7	377 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	CCM2L	Q9NUG4	571 aa	Predicted RBP	19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	QPCTL	Q9NXS2	382 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	MED11	Q9P086	117 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	TES	Q9UGI8	421 aa	Known RBP	19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	PRDM4	Q9UKN5	801 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	LIPG	Q9Y5X9	500 aa		19.94	■□□□□ 0.78
LTBP4-227	ENST00000600026	OIP5	O43482	229 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	CDC40	O60508	579 aa	Known RBP eCLIP	19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	ENTPD5	O75356	428 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	CBR3	O75828	277 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	NUDT14	O95848	222 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	SEMG1	P04279	462 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	LINGO3	P0C6S8	592 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	EDN3	P14138	238 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	PGC	P20142	388 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	ELF3	P78545	371 aa	Predicted RBP	19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	PLAUR	Q03405	335 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	EPS8	Q12929	822 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	CBFB	Q13951	182 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	ZFP1	Q6P2D0	407 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	CBLN3	Q6UW01	205 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	DEF8	Q6ZN54	512 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	CYP4Z1	Q86W10	505 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	ZDHHC21	Q8IVQ6	265 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	OR6T1	Q8NGN1	323 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	ZNF559	Q9BR84	538 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	IL1RAP	Q9NPH3	570 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	ICAM5	Q9UMF0	924 aa		19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	RRP15	Q9Y3B9	282 aa	Known RBP	19.93	■□□□□ 0.78
LTBP4-227	ENST00000600026	FAM32A	Q9Y421	112 aa	Known RBP	19.93	■□□□□ 0.78

Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms