RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 HSPB2A8KAH6 182 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 AP3D1O14617 1153 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 ADAMDEC1O15204 470 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 CYP7B1O75881 506 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 NUDT14O95848 222 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 SNRPB2P08579 225 aaKnown RBP10.02□□□□□ -0.81
VRK3-210ENST00000596121 ANXA11P50995 505 aaKnown RBP10.02□□□□□ -0.81
VRK3-210ENST00000596121 CCR4P51679 360 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 SUMO3P55854 103 aaPredicted RBP10.02□□□□□ -0.81
VRK3-210ENST00000596121 DLX5P56178 289 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 SESN3P58005 492 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 RAC1P63000 192 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 HPCAP84074 193 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 KLF10Q13118 480 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 HSPB2Q16082 182 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 ZNF836Q6ZNA1 936 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 COMTD1Q86VU5 262 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 CLIP4Q8N3C7 705 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 TMCO5AQ8N6Q1 288 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 TOR1AIP2Q8NFQ8 470 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 OIT3Q8WWZ8 545 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 DTNBP1Q96EV8 351 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 TREX2Q9BQ50 279 aaPredicted RBP10.02□□□□□ -0.81
VRK3-210ENST00000596121 CPPED1Q9BRF8 314 aaPredicted RBP10.02□□□□□ -0.81
VRK3-210ENST00000596121 HHATLQ9HCP6 504 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 DNAJB12Q9NXW2 375 aaKnown RBP10.02□□□□□ -0.81
VRK3-210ENST00000596121 ARMCX1Q9P291 453 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 P2RX2Q9UBL9 471 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 LEF1Q9UJU2 399 aaPredicted RBP10.02□□□□□ -0.81
VRK3-210ENST00000596121 NAV2Q8IVL1 2488 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 CACNA1DQ01668 2161 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 HCFC1P51610 2035 aa10.02□□□□□ -0.81
VRK3-210ENST00000596121 ABCA12Q86UK0 2595 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 EIF1AYO14602 144 aaKnown RBP10.01□□□□□ -0.81
VRK3-210ENST00000596121 CXCL13O43927 109 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 TNFSF13O75888 250 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 AQP8O94778 261 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 RCBTB2O95199 551 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 IL2RAP01589 272 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 DBIP07108 87 aaKnown RBP10.01□□□□□ -0.81
VRK3-210ENST00000596121 PRG2P13727 222 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 NID1P14543 1247 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 IGFBP2P18065 325 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 GPX2P18283 190 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 BMP5P22003 454 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 CTSSP25774 331 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 RYKP34925 604 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 EIF1P41567 113 aaKnown RBP10.01□□□□□ -0.81
VRK3-210ENST00000596121 ACAA2P42765 397 aaKnown RBP10.01□□□□□ -0.81
VRK3-210ENST00000596121 EEF1A1P68104 462 aaKnown RBP10.01□□□□□ -0.81
VRK3-210ENST00000596121 FADDQ13158 208 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 SNTB1Q13884 538 aaKnown RBP10.01□□□□□ -0.81
VRK3-210ENST00000596121 CBFBQ13951 182 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 CAPRIN1Q14444 709 aaKnown RBP10.01□□□□□ -0.81
VRK3-210ENST00000596121 PON3Q15166 354 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 SF3B4Q15427 424 aaKnown RBP eCLIP10.01□□□□□ -0.81
VRK3-210ENST00000596121 MRPL2Q5T653 305 aaKnown RBP10.01□□□□□ -0.81
VRK3-210ENST00000596121 DHDDSQ86SQ9 333 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 PTOV1Q86YD1 416 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 ZNF295-AS1Q8N0V1 137 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 GCNT2Q8N0V5 402 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 LILRA2Q8N149 483 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 MEIOBQ8N635 442 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 OR52P1PQ8NH57 321 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 OR10D3Q8NH80 312 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 FNDC9Q8TBE3 224 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 TSPEARQ8WU66 669 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 WDR60Q8WVS4 1066 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 INTS12Q96CB8 462 aaKnown RBP10.01□□□□□ -0.81
VRK3-210ENST00000596121 MRGPRX4Q96LA9 322 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 ANKRD27Q96NW4 1050 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 CGREF1Q99674 301 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 SLC39A3Q9BRY0 314 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 PINK1Q9BXM7 581 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 ENKD1Q9H0I2 346 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 BCL2L10Q9HD36 194 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 KCNJ16Q9NPI9 418 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 EXOSC3Q9NQT5 275 aaKnown RBP10.01□□□□□ -0.81
VRK3-210ENST00000596121 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.01□□□□□ -0.81
VRK3-210ENST00000596121 JKAMPQ9P055 326 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.01□□□□□ -0.81
VRK3-210ENST00000596121 SLC35A3Q9Y2D2 325 aa10.01□□□□□ -0.81
VRK3-210ENST00000596121 GPC6Q9Y625 555 aaPredicted RBP10.01□□□□□ -0.81
VRK3-210ENST00000596121 DCHS2Q6V1P9 2916 aa10□□□□□ -0.81
VRK3-210ENST00000596121 A0A0G2JPF8 293 aa10□□□□□ -0.81
VRK3-210ENST00000596121 LOC100653049A0A140TA62 436 aa10□□□□□ -0.81
VRK3-210ENST00000596121 CDHR4A6H8M9 788 aa10□□□□□ -0.81
VRK3-210ENST00000596121 SLC22A20A6NK97 555 aa10□□□□□ -0.81
VRK3-210ENST00000596121 HNRNPCL2B2RXH8 293 aa10□□□□□ -0.81
VRK3-210ENST00000596121 HNRNPCL3B7ZW38 293 aa10□□□□□ -0.81
VRK3-210ENST00000596121 FAM47E-STBD1D6RA91 191 aa10□□□□□ -0.81
VRK3-210ENST00000596121 FXYD1O00168 92 aa10□□□□□ -0.81
VRK3-210ENST00000596121 TNFSF11O14788 317 aa10□□□□□ -0.81
VRK3-210ENST00000596121 ANGPT2O15123 496 aa10□□□□□ -0.81
VRK3-210ENST00000596121 HNRNPCL1O60812 293 aaKnown RBP10□□□□□ -0.81
VRK3-210ENST00000596121 GCM2O75603 506 aaPredicted RBP10□□□□□ -0.81
VRK3-210ENST00000596121 KRT34O76011 436 aa10□□□□□ -0.81
VRK3-210ENST00000596121 PGM3O95394 542 aa10□□□□□ -0.81
VRK3-210ENST00000596121 GKN3PP0CG01 181 aa10□□□□□ -0.81
VRK3-210ENST00000596121 HNRNPCL4P0DMR1 293 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms