RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 SNAP29O95721 258 aa20.35■□□□□ 0.85
ATG4D-209ENST00000588857 ITGA3P26006 1051 aa20.35■□□□□ 0.85
ATG4D-209ENST00000588857 IL1RL1Q01638 556 aa20.35■□□□□ 0.85
ATG4D-209ENST00000588857 CLN3Q13286 438 aa20.35■□□□□ 0.85
ATG4D-209ENST00000588857 NHSL2Q5HYW2 709 aa20.35■□□□□ 0.85
ATG4D-209ENST00000588857 C6orf52Q5T4I8 152 aa20.35■□□□□ 0.85
ATG4D-209ENST00000588857 ZNF730Q6ZMV8 503 aa20.35■□□□□ 0.85
ATG4D-209ENST00000588857 SNIP1Q8TAD8 396 aaKnown RBP20.35■□□□□ 0.85
ATG4D-209ENST00000588857 DUSP19Q8WTR2 217 aa20.35■□□□□ 0.85
ATG4D-209ENST00000588857 SDHAF3Q9NRP4 125 aa20.35■□□□□ 0.85
ATG4D-209ENST00000588857 TMEFF2Q9UIK5 374 aaPredicted RBP20.35■□□□□ 0.85
ATG4D-209ENST00000588857 EML6Q6ZMW3 1958 aa20.35■□□□□ 0.85
ATG4D-209ENST00000588857 A0A1B0GWA3 101 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 THY1P04216 161 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 CDH2P19022 906 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-209ENST00000588857 ITPKBP27987 946 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 C17orf67Q0P5P2 114 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 ZIK1Q3SY52 487 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-209ENST00000588857 ATP1A1-AS1Q5TC04 95 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 B3GNTL1Q67FW5 361 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-209ENST00000588857 ULK3Q6PHR2 472 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 APLFQ8IW19 511 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-209ENST00000588857 AQP11Q8NBQ7 271 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 OR4K5Q8NGD3 323 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 RNF138Q8WVD3 245 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 ACOT11Q8WXI4 607 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-209ENST00000588857 LHPPQ9H008 270 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 HPF1Q9NWY4 346 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 MGAT4BQ9UQ53 548 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 AP4B1Q9Y6B7 739 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 URB1O60287 2271 aaKnown RBP20.34■□□□□ 0.85
ATG4D-209ENST00000588857 A0A087WV48 116 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 A0A0B4J2E0 115 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 A0A1B0GX12 115 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 IFNGR2P38484 337 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 ST13P50502 369 aaKnown RBP20.34■□□□□ 0.85
ATG4D-209ENST00000588857 RRADP55042 308 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 MERTKQ12866 999 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 WLSQ5T9L3 541 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 ZNF770Q6IQ21 691 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-209ENST00000588857 GALNT5Q7Z7M9 940 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 NKAIN4Q8IVV8 208 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 DHRSXQ8N5I4 330 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 B4GALNT2Q8NHY0 566 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 ZNF563Q8TA94 476 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 DNAJA4Q8WW22 397 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-209ENST00000588857 CYGBQ8WWM9 190 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 PSMF1Q92530 271 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 SECISBP2Q96T21 854 aaKnown RBP20.34■□□□□ 0.85
ATG4D-209ENST00000588857 ADI1Q9BV57 179 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 TOR3AQ9H497 397 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 HHATLQ9HCP6 504 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 ICAM5Q9UMF0 924 aa20.34■□□□□ 0.85
ATG4D-209ENST00000588857 ANKRD11Q6UB99 2663 aaPredicted RBP20.33■□□□□ 0.85
ATG4D-209ENST00000588857 PCNX3Q9H6A9 2034 aa20.33■□□□□ 0.85
ATG4D-209ENST00000588857 MED13Q9UHV7 2174 aa20.33■□□□□ 0.85
ATG4D-209ENST00000588857 A0A087WUU8 490 aa20.33■□□□□ 0.84
ATG4D-209ENST00000588857 NKX2-8O15522 239 aa20.33■□□□□ 0.84
ATG4D-209ENST00000588857 CHP2O43745 196 aa20.33■□□□□ 0.84
ATG4D-209ENST00000588857 GMFGO60234 142 aa20.33■□□□□ 0.84
ATG4D-209ENST00000588857 MITFO75030 526 aaPredicted RBP20.33■□□□□ 0.84
ATG4D-209ENST00000588857 NUDT14O95848 222 aa20.33■□□□□ 0.84
ATG4D-209ENST00000588857 PRKAR1AP10644 381 aa20.33■□□□□ 0.84
ATG4D-209ENST00000588857 CBLP22681 906 aa20.33■□□□□ 0.84
ATG4D-209ENST00000588857 EIF2S3P41091 472 aaKnown RBP20.33■□□□□ 0.84
ATG4D-209ENST00000588857 IDH2P48735 452 aaKnown RBP20.33■□□□□ 0.84
ATG4D-209ENST00000588857 P2RX1P51575 399 aa20.33■□□□□ 0.84
ATG4D-209ENST00000588857 SRSF6Q13247 344 aaKnown RBP20.33■□□□□ 0.84
ATG4D-209ENST00000588857 SNTA1Q13424 505 aa20.33■□□□□ 0.84
ATG4D-209ENST00000588857 ALG10BQ5I7T1 473 aa20.33■□□□□ 0.84
ATG4D-209ENST00000588857 WBP2NLQ6ICG8 309 aa20.33■□□□□ 0.84
ATG4D-209ENST00000588857 OR5W2Q8NH69 310 aa20.33■□□□□ 0.84
ATG4D-209ENST00000588857 TMEM255BQ8WV15 326 aa20.33■□□□□ 0.84
ATG4D-209ENST00000588857 GALNT9Q9HCQ5 603 aa20.33■□□□□ 0.84
ATG4D-209ENST00000588857 PAPOLBQ9NRJ5 636 aaKnown RBP20.33■□□□□ 0.84
ATG4D-209ENST00000588857 POFUT2Q9Y2G5 429 aa20.33■□□□□ 0.84
ATG4D-209ENST00000588857 CHCHD2Q9Y6H1 151 aaPredicted RBP20.33■□□□□ 0.84
ATG4D-209ENST00000588857 C2orf72A6NCS6 295 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 GASTP01350 101 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 POU2F1P14859 743 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 PGCP20142 388 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 CASP3P42574 277 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 UGT2B15P54855 530 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 CBFBQ13951 182 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 SWT1Q5T5J6 900 aaKnown RBP20.32■□□□□ 0.84
ATG4D-209ENST00000588857 ABHD17BQ5VST6 288 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 BICRALQ6AI39 1079 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 TFAP2CQ92754 450 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 GTPBP3Q969Y2 492 aaKnown RBP20.32■□□□□ 0.84
ATG4D-209ENST00000588857 NAF1Q96HR8 494 aaKnown RBP20.32■□□□□ 0.84
ATG4D-209ENST00000588857 MPP4Q96JB8 637 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 SGCZQ96LD1 299 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 NIPSNAP1Q9BPW8 284 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 PRSS27Q9BQR3 290 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 KRCC1Q9NPI7 259 aaPredicted RBP20.32■□□□□ 0.84
ATG4D-209ENST00000588857 STMN3Q9NZ72 180 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 PPP4R1LQ9P1A2 415 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 ABI3Q9P2A4 366 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 LRCH1Q9Y2L9 728 aa20.32■□□□□ 0.84
ATG4D-209ENST00000588857 CPAMD8Q8IZJ3 1885 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms