RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 PAGE3Q5JUK9 113 aa2.86□□□□□ -1.95
CDC27-216ENST00000574304 ZNF691Q5VV52 312 aa2.86□□□□□ -1.95
CDC27-216ENST00000574304 FAHD2BQ6P2I3 314 aaPredicted RBP2.86□□□□□ -1.95
CDC27-216ENST00000574304 FAM199XQ6PEV8 388 aaPredicted RBP2.86□□□□□ -1.95
CDC27-216ENST00000574304 LHFPL4Q7Z7J7 247 aa2.86□□□□□ -1.95
CDC27-216ENST00000574304 CBWD2Q8IUF1 395 aa2.86□□□□□ -1.95
CDC27-216ENST00000574304 Q8N9W7 124 aa2.86□□□□□ -1.95
CDC27-216ENST00000574304 FAHD2AQ96GK7 314 aa2.86□□□□□ -1.95
CDC27-216ENST00000574304 TESK2Q96S53 571 aa2.86□□□□□ -1.95
CDC27-216ENST00000574304 DUSP16Q9BY84 665 aa2.86□□□□□ -1.95
CDC27-216ENST00000574304 AGPAT5Q9NUQ2 364 aa2.86□□□□□ -1.95
CDC27-216ENST00000574304 UGT2A1Q9Y4X1 527 aa2.86□□□□□ -1.95
CDC27-216ENST00000574304 SPACA6W5XKT8 324 aa2.86□□□□□ -1.95
CDC27-216ENST00000574304 IGKV2D-24A0A075B6R9 120 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 IGKV6-21A0A0C4DH24 114 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 STX7O15400 261 aaKnown RBP2.85□□□□□ -1.95
CDC27-216ENST00000574304 ZNF780AO75290 641 aaPredicted RBP2.85□□□□□ -1.95
CDC27-216ENST00000574304 SLITRK3O94933 977 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 MT-ND3P03897 115 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 MMP1P03956 469 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 CSF2P04141 144 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 RNH1P13489 461 aaKnown RBP2.85□□□□□ -1.95
CDC27-216ENST00000574304 FUT1P19526 365 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 PRDX3P30048 256 aaKnown RBP2.85□□□□□ -1.95
CDC27-216ENST00000574304 PTGFRP43088 359 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 NAPAP54920 295 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 CHRNB3Q05901 458 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 RIPPLY1Q0D2K3 151 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 ACSM5Q6NUN0 579 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 ARSKQ6UWY0 536 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 APTXQ7Z2E3 356 aaKnown RBP2.85□□□□□ -1.95
CDC27-216ENST00000574304 AENQ8WTP8 325 aaKnown RBP2.85□□□□□ -1.95
CDC27-216ENST00000574304 VPS35Q96QK1 796 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 RHOJQ9H4E5 214 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 VAT1LQ9HCJ6 419 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 ATXN10Q9UBB4 475 aa2.85□□□□□ -1.95
CDC27-216ENST00000574304 PRPF19Q9UMS4 504 aaKnown RBP2.85□□□□□ -1.95
CDC27-216ENST00000574304 A0A0U1RQV5 110 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 RNF103-CHMP3A0A140T963 221 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 GJE1A6NN92 205 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 ANKRD63C9JTQ0 380 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 ICOSLGO75144 302 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 ECI2O75521 394 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 LALBAP00709 142 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 F10P00742 488 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 OPN1LWP04000 364 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 COX7A1P24310 79 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 PLK1P53350 603 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 CCDC173Q0VFZ6 552 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 RAB40BQ12829 278 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 TRIP10Q15642 601 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 LINC01620Q4KN68 170 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 RAET1GQ6H3X3 334 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 RBM43Q6ZSC3 357 aaKnown RBP2.84□□□□□ -1.95
CDC27-216ENST00000574304 CENPUQ71F23 418 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 ERASQ7Z444 233 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 ZNF429Q86V71 674 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 TMEM17Q86X19 198 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 MISPQ8IVT2 679 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 C15orf54Q8N8G6 183 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 MDS2Q8NDY4 140 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 OR52B4Q8NGK2 314 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 PAQR8Q8TEZ7 354 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 UCN3Q969E3 161 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 ECT2Q9H8V3 914 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 AIG1Q9NVV5 245 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 MGAT4BQ9UQ53 548 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 NEUROG3Q9Y4Z2 214 aa2.84□□□□□ -1.95
CDC27-216ENST00000574304 RLFQ13129 1914 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 ESYT2A0FGR8 921 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 HELTA6NFD8 242 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 TCP11X1B4DZS4 312 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 RASGRF2O14827 1237 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 JAK2O60674 1132 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 WISP3O95389 354 aaPredicted RBP2.83□□□□□ -1.96
CDC27-216ENST00000574304 PAICSP22234 425 aaKnown RBP2.83□□□□□ -1.96
CDC27-216ENST00000574304 CALB2P22676 271 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 CSNK1DP48730 415 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 PFN3P60673 137 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 PRPS1P60891 318 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 HSF2Q03933 536 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 CEBPEQ15744 281 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 MAPK6Q16659 721 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 ZNF311Q5JNZ3 666 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 RABGAP1LQ5R372 815 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 NIPAL3Q6P499 406 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 H1FOOQ8IZA3 346 aaPredicted RBP2.83□□□□□ -1.96
CDC27-216ENST00000574304 MRPL43Q8N983 215 aaKnown RBP2.83□□□□□ -1.96
CDC27-216ENST00000574304 NANPQ8TBE9 248 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 FAM151AQ8WW52 585 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 RPUSD4Q96CM3 377 aaKnown RBP2.83□□□□□ -1.96
CDC27-216ENST00000574304 AKR1E2Q96JD6 320 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 TMEM237Q96Q45 408 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 VCXQ9H320 206 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 DHX33Q9H6R0 707 aaKnown RBP2.83□□□□□ -1.96
CDC27-216ENST00000574304 PSG11Q9UQ72 335 aa2.83□□□□□ -1.96
CDC27-216ENST00000574304 ARHGAP21Q5T5U3 1957 aa2.82□□□□□ -1.96
CDC27-216ENST00000574304 IGKV2-28A0A075B6P5 120 aa2.82□□□□□ -1.96
CDC27-216ENST00000574304 A0A0G2JRQ6 117 aa2.82□□□□□ -1.96
CDC27-216ENST00000574304 NKX2-6A6NCS4 301 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms