RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 ZNF559Q9BR84 538 aa14.92□□□□□ -0.02
CDT1-202ENST00000562747 TMUB1Q9BVT8 246 aa14.92□□□□□ -0.02
CDT1-202ENST00000562747 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.92□□□□□ -0.02
CDT1-202ENST00000562747 SLC25A37Q9NYZ2 338 aa14.92□□□□□ -0.02
CDT1-202ENST00000562747 SLAMF8Q9P0V8 285 aa14.92□□□□□ -0.02
CDT1-202ENST00000562747 KLHL14Q9P2G3 628 aa14.92□□□□□ -0.02
CDT1-202ENST00000562747 CLCF1Q9UBD9 225 aa14.92□□□□□ -0.02
CDT1-202ENST00000562747 LEF1Q9UJU2 399 aaPredicted RBP14.92□□□□□ -0.02
CDT1-202ENST00000562747 NDUFAF1Q9Y375 327 aa14.92□□□□□ -0.02
CDT1-202ENST00000562747 GPC6Q9Y625 555 aaPredicted RBP14.92□□□□□ -0.02
CDT1-202ENST00000562747 TRBV5-3A0A0A0MS03 114 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 TMEM247A6NEH6 219 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 AGAP5A6NIR3 686 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 SHISA8B8ZZ34 492 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 DNAJA2O60884 412 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 TFPTP0C1Z6 253 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 BMP2P12643 396 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 RPS4Y1P22090 263 aaKnown RBP14.91□□□□□ -0.02
CDT1-202ENST00000562747 ELK4P28324 431 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 PGM1P36871 562 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 SUCLG1P53597 346 aaKnown RBP14.91□□□□□ -0.02
CDT1-202ENST00000562747 IST1P53990 364 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 CRISP3P54108 245 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 CLDN15P56746 228 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 RPS3AP61247 264 aaKnown RBP14.91□□□□□ -0.02
CDT1-202ENST00000562747 RAC1P63000 192 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 KCNJ10P78508 379 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 MAPK11Q15759 364 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 SLC25A35Q3KQZ1 300 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 MSRB3Q8IXL7 192 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 CMIPQ8IY22 773 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 DPP10Q8N608 796 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 METTL25Q8N6Q8 603 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 NAXEQ8NCW5 288 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 POC1BQ8TC44 478 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 ZG16BQ96DA0 208 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 NPAS1Q99742 590 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 VAPAQ9P0L0 249 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 ZNF629Q9UEG4 869 aaPredicted RBP14.91□□□□□ -0.02
CDT1-202ENST00000562747 KCNN3Q9UGI6 736 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 CORO2BQ9UQ03 480 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 DSPPQ9NZW4 1301 aa14.91□□□□□ -0.02
CDT1-202ENST00000562747 HRNRQ86YZ3 2850 aaPredicted RBP14.91□□□□□ -0.02
CDT1-202ENST00000562747 ETV2O00321 342 aaPredicted RBP14.9□□□□□ -0.02
CDT1-202ENST00000562747 ANGPT2O15123 496 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 SEC14L5O43304 696 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 BCHEP06276 602 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 UBTFL6P0CB48 400 aaPredicted RBP14.9□□□□□ -0.02
CDT1-202ENST00000562747 PRKCAP17252 672 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 HOXB4P17483 251 aaPredicted RBP14.9□□□□□ -0.02
CDT1-202ENST00000562747 ME2P23368 584 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 CCR4P51679 360 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 DLX5P56178 289 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 CLDN20P56880 219 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 FOXF1Q12946 379 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 MYBPHQ13203 477 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 SLC25A53Q5H9E4 307 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 GGNQ86UU5 652 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 GRAMD2AQ8IUY3 354 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 PEX5LQ8IYB4 626 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 C9orf106Q8NAJ2 232 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 SLC38A5Q8WUX1 472 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 SMPDL3BQ92485 455 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 MRGPRX4Q96LA9 322 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 QRSL1Q9H0R6 528 aaKnown RBP14.9□□□□□ -0.02
CDT1-202ENST00000562747 A4GALTQ9NPC4 353 aa14.9□□□□□ -0.02
CDT1-202ENST00000562747 EXOSC3Q9NQT5 275 aaKnown RBP14.9□□□□□ -0.02
CDT1-202ENST00000562747 PRRC2AP48634 2157 aaKnown RBP14.9□□□□□ -0.02
CDT1-202ENST00000562747 KIAA1549Q9HCM3 1950 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 A0A0G2JPF8 293 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 HNRNPCL2B2RXH8 293 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 HNRNPCL3B7ZW38 293 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 DVL2O14641 736 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 HNRNPCL1O60812 293 aaKnown RBP14.89□□□□□ -0.03
CDT1-202ENST00000562747 CYP7B1O75881 506 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 RCBTB2O95199 551 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 NTN1O95631 604 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 IL18BPO95998 194 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 DBIP07108 87 aaKnown RBP14.89□□□□□ -0.03
CDT1-202ENST00000562747 HNRNPCL4P0DMR1 293 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 CD99P14209 185 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 IL7RP16871 459 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 PGCP20142 388 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 CTSSP25774 331 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 ZNF136P52737 540 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 QPRTQ15274 297 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 TOMM34Q15785 309 aaPredicted RBP14.89□□□□□ -0.03
CDT1-202ENST00000562747 PRAMEF8Q5VWM4 474 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 PRAMEF7Q5VXH5 474 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 DLEU7Q6UYE1 221 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 LIX1LQ8IVB5 337 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 FBXO27Q8NI29 283 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 WDR60Q8WVS4 1066 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 ST8SIA1Q92185 356 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 TMEM19Q96HH6 336 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 THUMPD3Q9BV44 507 aaKnown RBP14.89□□□□□ -0.03
CDT1-202ENST00000562747 CXXC4Q9H2H0 198 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 LIME1Q9H400 295 aa14.89□□□□□ -0.03
CDT1-202ENST00000562747 PAQR5Q9NXK6 330 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms