RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 ID4P47928 161 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 PGDP52209 483 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 CRISP1P54107 249 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 ATP12AP54707 1039 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 RGS8P57771 180 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-210ENST00000561817 SLC35A2P78381 396 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 HPCAP84074 193 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 EFNB1P98172 346 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 MC2RQ01718 297 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 TOP3AQ13472 1001 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-210ENST00000561817 FGFBP1Q14512 234 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 TRAM2Q15035 370 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 EBPQ15125 230 aaKnown RBP6.01□□□□□ -1.45
CAPN3-210ENST00000561817 PTGES3Q15185 160 aaKnown RBP6.01□□□□□ -1.45
CAPN3-210ENST00000561817 SMN1Q16637 294 aaKnown RBP6.01□□□□□ -1.45
CAPN3-210ENST00000561817 DECR1Q16698 335 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 NKAIN1Q4KMZ8 207 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 KLHL26Q53HC5 615 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 EIPR1Q53HC9 387 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 FGD3Q5JSP0 725 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 FAM209AQ5JX71 171 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 ARMC4Q5T2S8 1044 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 PDZK1Q5T2W1 519 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 SLX4IPQ5VYV7 408 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 C12orf73Q69YU5 71 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 GTF2IRD2BQ6EKJ0 949 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 XAF1Q6GPH4 301 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 SHISA2Q6UWI4 295 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 WDR88Q6ZMY6 472 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 LANCL3Q6ZV70 420 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 OVCH1Q7RTY7 1134 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 MRGPREQ86SM8 312 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 GTF2IRD2Q86UP8 949 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 KIF18BQ86Y91 864 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 NKAIN4Q8IVV8 208 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 CCDC103Q8IW40 242 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 C9orf40Q8IXQ3 194 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 LINC00471Q8N535 108 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 SETD9Q8NE22 299 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 FAM71CQ8NEG0 241 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 DEFB124Q8NES8 71 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 TOR1AIP2Q8NFQ8 470 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 OR4K5Q8NGD3 323 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 OR14A16Q8NHC5 309 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 STT3BQ8TCJ2 826 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 OIT3Q8WWZ8 545 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 TMIGD2Q96BF3 282 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 RNF31Q96EP0 1072 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 SLC41A3Q96GZ6 507 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 SLC46A1Q96NT5 459 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 GFM1Q96RP9 751 aaKnown RBP6.01□□□□□ -1.45
CAPN3-210ENST00000561817 MCHR1Q99705 422 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 WDR77Q9BQA1 342 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-210ENST00000561817 MESP1Q9BRJ9 268 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 CNPPD1Q9BV87 410 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 FNDC11Q9BVV2 318 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 SEMA4CQ9C0C4 833 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 NXF5Q9H1B4 397 aaKnown RBP6.01□□□□□ -1.45
CAPN3-210ENST00000561817 SLC26A1Q9H2B4 701 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 TRIM45Q9H8W5 580 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-210ENST00000561817 AKIRIN1Q9H9L7 192 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-210ENST00000561817 CTPS2Q9NRF8 586 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 PNO1Q9NRX1 252 aaKnown RBP6.01□□□□□ -1.45
CAPN3-210ENST00000561817 PLCXD1Q9NUJ7 323 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 KLHL28Q9NXS3 571 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 FLRT3Q9NZU0 649 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 KIF17Q9P2E2 1029 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 PRODH2Q9UF12 536 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 RARRES3Q9UL19 164 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 CBLCQ9ULV8 474 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 CEPT1Q9Y6K0 416 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 FAM186AA6NE01 2351 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 TRAPPC13A5PLN9 417 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 FRG2CA6NGY1 282 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 A8MUA0 341 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 B4E171 279 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 AP3D1O14617 1153 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 XPNPEP2O43895 674 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 OR10H3O60404 316 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 TSPAN2O60636 221 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 SCRG1O75711 98 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 LDOC1O95751 146 aaPredicted RBP6□□□□□ -1.45
CAPN3-210ENST00000561817 ANGPTL1O95841 491 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 GKN3PP0CG01 181 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 POU2F1P14859 743 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 ZNF28P17035 718 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 TNNI3P19429 210 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 FMO3P31513 532 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 NOVA1P51513 510 aaKnown RBP6□□□□□ -1.45
CAPN3-210ENST00000561817 UGT2B15P54855 530 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 TAS2R41P59536 307 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 GABREP78334 506 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 DCDP81605 110 aaKnown RBP6□□□□□ -1.45
CAPN3-210ENST00000561817 CDK5Q00535 292 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 IL5RAQ01344 420 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 IL1RL1Q01638 556 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 PIGFQ07326 219 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 ST3GAL3Q11203 375 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 COX10Q12887 443 aa6□□□□□ -1.45
CAPN3-210ENST00000561817 TMED1Q13445 227 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms