RNA–Protein interactions for RNA: ENST00000560263.1

SEMA4B-216, Transcript of semaphorin 4B, humanhuman

TSL 4

Gene SEMA4B, Length 540 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-216ENST00000560263 SEM1Q6ZVN7 128 aa14.04□□□□□ -0.16
SEMA4B-216ENST00000560263 PTOV1Q86YD1 416 aa14.04□□□□□ -0.16
SEMA4B-216ENST00000560263 OR10Q1Q8NGQ4 319 aa14.04□□□□□ -0.16
SEMA4B-216ENST00000560263 RND1Q92730 232 aa14.04□□□□□ -0.16
SEMA4B-216ENST00000560263 PSMG3-AS1Q96PY0 264 aa14.04□□□□□ -0.16
SEMA4B-216ENST00000560263 TMEM185BQ9H7F4 350 aa14.04□□□□□ -0.16
SEMA4B-216ENST00000560263 GID8Q9NWU2 228 aa14.04□□□□□ -0.16
SEMA4B-216ENST00000560263 DNAJB12Q9NXW2 375 aaKnown RBP14.04□□□□□ -0.16
SEMA4B-216ENST00000560263 ARL2BPQ9Y2Y0 163 aa14.04□□□□□ -0.16
SEMA4B-216ENST00000560263 NCOA6Q14686 2063 aaPredicted RBP14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 LINC01387J3KSC0 135 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 AP3D1O14617 1153 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 DNAJA2O60884 412 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 EPPINO95925 133 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 PABPC4LP0CB38 370 aaKnown RBP14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 PGCP20142 388 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 SLC6A2P23975 617 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 EEF1A1P68104 462 aaKnown RBP14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 LARS2Q15031 903 aaKnown RBP14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 ZNF311Q5JNZ3 666 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 PRAMEF8Q5VWM4 474 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 PRAMEF7Q5VXH5 474 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 GGNQ86UU5 652 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 LSRQ86X29 649 aaPredicted RBP14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 CCDC71Q8IV32 467 aaPredicted RBP14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 CMIPQ8IY22 773 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 ZZZ3Q8IYH5 903 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 CLIP4Q8N3C7 705 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 ZNF808Q8N4W9 903 aaPredicted RBP14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 MEIOBQ8N635 442 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 METTL25Q8N6Q8 603 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 ZNF563Q8TA94 476 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 ZPLD1Q8TCW7 415 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 SDCCAG3Q96C92 435 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 RSPO3Q9BXY4 272 aaPredicted RBP14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 CACYBPQ9HB71 228 aaKnown RBP14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 EXOSC3Q9NQT5 275 aaKnown RBP14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 ADAM21Q9UKJ8 722 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 ZNF232Q9UNY5 417 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 RNF6Q9Y252 685 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 CHST2Q9Y4C5 530 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 GPC6Q9Y625 555 aaPredicted RBP14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 AP4B1Q9Y6B7 739 aa14.03□□□□□ -0.16
SEMA4B-216ENST00000560263 A0A0G2JNJ9 132 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 CDHR4A6H8M9 788 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 CLCA1A8K7I4 914 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 EFNA2O43921 213 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 TOXO94900 526 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 CLDN1O95832 211 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 NPPAP01160 153 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 THBS1P07996 1170 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 GKN3PP0CG01 181 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 SHC1P29353 583 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 EIF1P41567 113 aaKnown RBP14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 GZMMP51124 257 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 SESN3P58005 492 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 NSUN5P2Q63ZY6 315 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 POMZP3Q6PJE2 187 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 NET1Q7Z628 596 aaPredicted RBP14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 SERPINA11Q86U17 422 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 LACC1Q8IV20 430 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 C11orf65Q8NCR3 313 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 HIPK4Q8NE63 616 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 ATP6V1C2Q8NEY4 427 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 TNIP2Q8NFZ5 429 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 OR8J3Q8NGG0 315 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 SH3GL1Q99961 368 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 COQ3Q9NZJ6 369 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 Q9UFV3 132 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 USP22Q9UPT9 525 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 ANGPT4Q9Y264 503 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 IFT52Q9Y366 437 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 COL12A1Q99715 3063 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 DOPEY2Q9Y3R5 2298 aa14.02□□□□□ -0.17
SEMA4B-216ENST00000560263 LRRK2Q5S007 2527 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 CD8B2A6NJW9 211 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 EIF1AYO14602 144 aaKnown RBP14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 FRS3O43559 492 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 SHOX2O60902 331 aaPredicted RBP14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 NTN1O95631 604 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 FAM107AO95990 144 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 ETS2P15036 469 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 ADH6P28332 368 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 SFTPDP35247 375 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 SLC6A8P48029 635 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 IDH2P48735 452 aaKnown RBP14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 RAC1P63000 192 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 RBBP4Q09028 425 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 MERTKQ12866 999 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 SF3B4Q15427 424 aaKnown RBP eCLIP14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 SLC25A53Q5H9E4 307 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 RNF220Q5VTB9 566 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 XKRXQ6PP77 449 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 CHMP1BQ7LBR1 199 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 CALHM3Q86XJ0 350 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 KRT73Q86Y46 540 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 LILRA2Q8N149 483 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 C9orf106Q8NAJ2 232 aa14.01□□□□□ -0.17
SEMA4B-216ENST00000560263 TMEM234Q8WY98 164 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms