RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 OR2A2Q6IF42 318 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 ESPNLQ6ZVH7 1005 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 GGNQ86UU5 652 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 DPP10Q8N608 796 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 C9orf106Q8NAJ2 232 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 FBXO27Q8NI29 283 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 POC1BQ8TC44 478 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 ZG16BQ96DA0 208 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 ZNF317Q96PQ6 595 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-209ENST00000557342 PINK1Q9BXM7 581 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 UCK2Q9BZX2 261 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 QRSL1Q9H0R6 528 aaKnown RBP11.25□□□□□ -0.61
SLIRP-209ENST00000557342 ARMC7Q9H6L4 198 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 A4GALTQ9NPC4 353 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 VAPAQ9P0L0 249 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 SLAMF8Q9P0V8 285 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 PRDM4Q9UKN5 801 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 ZNF232Q9UNY5 417 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 ZNF175Q9Y473 711 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 TRBV5-3A0A0A0MS03 114 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 NKX2-6A6NCS4 301 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 ETV2O00321 342 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-209ENST00000557342 EIF1AYO14602 144 aaKnown RBP11.24□□□□□ -0.61
SLIRP-209ENST00000557342 CRHP06850 196 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 THBS1P07996 1170 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 FCGR2AP12318 317 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 NID1P14543 1247 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 COX6B1P14854 86 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 GPX2P18283 190 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 BMP5P22003 454 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 ZNF136P52737 540 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 CLDN15P56746 228 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 SELENBP1Q13228 472 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 NFYCQ13952 458 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 LARS2Q15031 903 aaKnown RBP11.24□□□□□ -0.61
SLIRP-209ENST00000557342 MAPK11Q15759 364 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 TOMM34Q15785 309 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-209ENST00000557342 LIN52Q52LA3 116 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 RUNDC3AQ59EK9 446 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 GCNT6Q5T4J0 391 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 DLEU7Q6UYE1 221 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 DHDDSQ86SQ9 333 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 LIX1LQ8IVB5 337 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 MSRB3Q8IXL7 192 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 ZNF440Q8IYI8 595 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 LILRA2Q8N149 483 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 NAXEQ8NCW5 288 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 OR52P1PQ8NH57 321 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 ZNF563Q8TA94 476 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 BBS10Q8TAM1 723 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 TMEM19Q96HH6 336 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 KLHL15Q96M94 604 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 NPAS1Q99742 590 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 TREX2Q9BQ50 279 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-209ENST00000557342 KLHDC3Q9BQ90 382 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 SFXN3Q9BWM7 321 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 BCL2L10Q9HD36 194 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 SAR1AQ9NR31 198 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 SERINC1Q9NRX5 453 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 IFT52Q9Y366 437 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 DSPPQ9NZW4 1301 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 COL12A1Q99715 3063 aa11.24□□□□□ -0.61
SLIRP-209ENST00000557342 SPTAN1Q13813 2472 aaKnown RBP11.24□□□□□ -0.61
SLIRP-209ENST00000557342 BBIP1A8MTZ0 92 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 H0YC42 278 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 C19orf84I3L1E1 186 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 ADAMDEC1O15204 470 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 SLC22A2O15244 555 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 SYNGR4O95473 234 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 NTN1O95631 604 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 ARAFP10398 606 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 UQCRBP14927 111 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 CD1EP15812 388 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 EIF1AXP47813 144 aaKnown RBP11.23□□□□□ -0.61
SLIRP-209ENST00000557342 ASCL1P50553 236 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 TPD52P55327 224 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-209ENST00000557342 DLX5P56178 289 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 SESN3P58005 492 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 TFF3Q07654 80 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 SF3A3Q12874 501 aaKnown RBP eCLIP11.23□□□□□ -0.61
SLIRP-209ENST00000557342 KLF10Q13118 480 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 PON3Q15166 354 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 MMEL1Q495T6 779 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 COQ5Q5HYK3 327 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 MRPL2Q5T653 305 aaKnown RBP11.23□□□□□ -0.61
SLIRP-209ENST00000557342 ZNF787Q6DD87 383 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 HMGN2P46Q86SG4 172 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 OR10D3Q8NH80 312 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 OR2V1Q8NHB1 315 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 C10orf82Q8WW14 230 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 ANKRD27Q96NW4 1050 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 CGREF1Q99674 301 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 SPOCK3Q9BQ16 436 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 CPPED1Q9BRF8 314 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-209ENST00000557342 PRRG4Q9BZD6 226 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 NSRP1Q9H0G5 558 aaKnown RBP11.23□□□□□ -0.61
SLIRP-209ENST00000557342 ENKD1Q9H0I2 346 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 TMEM38AQ9H6F2 299 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 SLC24A3Q9HC58 644 aa11.23□□□□□ -0.61
SLIRP-209ENST00000557342 TIGARQ9NQ88 270 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms