RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 NUDT5Q9UKK9 219 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 PACSIN3Q9UKS6 424 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ASB1Q9Y576 335 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 TRPM6Q9BX84 2022 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 NUP210LQ5VU65 1888 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 MYO18BQ8IUG5 2567 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 FRYQ5TBA9 3013 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 URB1O60287 2271 aaKnown RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ZFC3H1O60293 1989 aaKnown RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 TBC1D3DA0A087WVF3 549 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 TBC1D3IA0A087WXS9 549 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 TBC1D3EA0A087X179 549 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 TBC1D3KA0A087X1G2 549 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 TBC1D3FA6NER0 549 aaPredicted RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 FAM90A8PA6NJQ4 464 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 CYSRT1A8MQ03 144 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 ADARB2-AS1A8MUL3 147 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 TBC1D3LB9A6J9 549 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 POC1B-GALNT4F8VUJ3 575 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 AQP9O43315 295 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 MSI1O43347 362 aaKnown RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 SHOX2O60902 331 aaPredicted RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 UPK3AO75631 287 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 RSL1D1O76021 490 aaKnown RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 GLCEO94923 617 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 OR4F21O95013 312 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 ATP6V1G2O95670 118 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 FAM107AO95990 144 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 F10P00742 488 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 FAM90A13PP0C7W8 464 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 FAM90A24PP0C7X0 464 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 TBC1D3HP0C7X1 549 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 FCGR1AP12314 374 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 MALP21145 153 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 PTPN7P35236 360 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 RGRP47804 291 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 MMP15P51511 669 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 FGF8P55075 233 aaPredicted RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 FAM3BP58499 235 aaPredicted RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 RPS24P62847 133 aaKnown RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 ELF3P78545 371 aaPredicted RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 ADORA2A-AS1P86434 159 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 PLAURQ03405 335 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 OCA2Q04671 838 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 STX4Q12846 297 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 AIMP2Q13155 320 aaKnown RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 PTPRCAPQ14761 206 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 PHKG1Q16816 387 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 C4orf17Q53FE4 359 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 TEX30Q5JUR7 227 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 TTC23Q5W5X9 447 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 TBC1D3GQ6DHY5 549 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 TBC1D3CQ6IPX1 549 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 FBXL22Q6P050 247 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 RNASEKQ6P5S7 137 aaKnown RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 C22orf39Q6P5X5 142 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 LRRC8BQ6P9F7 803 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 VWA1Q6PCB0 445 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 RFWD3Q6PCD5 774 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 PID1Q7Z2X4 250 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 C16orf62Q7Z3J2 963 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 TBC1D3Q8IZP1 549 aaPredicted RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 HS3ST5Q8IZT8 346 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 LGI2Q8N0V4 545 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 LILRA2Q8N149 483 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 C4orf33Q8N1A6 199 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 FBXO39Q8N4B4 442 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 PROKR2Q8NFJ6 384 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 OR13H1Q8NG92 308 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 OR5M8Q8NGP6 311 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 OR9A2Q8NGT5 310 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 OR2L8Q8NGY9 312 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 PIWIL2Q8TC59 973 aaKnown RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 MAPK15Q8TD08 544 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 FBLIM1Q8WUP2 373 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 SNX33Q8WV41 574 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 RAB40AQ8WXH6 277 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 RPL3LQ92901 407 aaKnown RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 HGDQ93099 445 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 MMABQ96EY8 250 aaPredicted RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 WDR89Q96FK6 387 aaPredicted RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF570Q96NI8 536 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 RBBP8Q99708 897 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 SLC17A9Q9BYT1 436 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 TM6SF2Q9BZW4 377 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 ALX4Q9H161 411 aaPredicted RBP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 UBQLN3Q9H347 655 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 LDAHQ9H6V9 325 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 SIAEQ9HAT2 523 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 ACSS2Q9NR19 701 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 ADA2Q9NZK5 511 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 ADAM22Q9P0K1 906 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 IL36AQ9UHA7 158 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 SLC23A1Q9UHI7 598 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 RNF150Q9ULK6 438 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.5□□□□□ -2.01
PRPF39-206ENST00000554429 NEU3Q9UQ49 428 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 ARL2BPQ9Y2Y0 163 aa2.5□□□□□ -2.01
PRPF39-206ENST00000554429 UBE2J1Q9Y385 318 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms