RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 HSP90AA5PQ58FG0 334 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 CT45A2Q5DJT8 189 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 SPECC1LQ69YQ0 1117 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 ALKAL1Q6UXT8 129 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 ZNF730Q6ZMV8 503 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 VPS36Q86VN1 386 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 C17orf64Q86WR6 236 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 ECHDC2Q86YB7 292 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 VSTM4Q8IW00 320 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 FBXL13Q8NEE6 735 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 LILRB4Q8NHJ6 448 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 SPPL2AQ8TCT8 520 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 SSC4DQ8WTU2 575 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 RNF139Q8WU17 664 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 CHPT1Q8WUD6 406 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 DYDC1Q8WWB3 177 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 GLYATL1Q969I3 302 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 CCDC127Q96BQ5 260 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 PCED1BQ96HM7 432 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 CCDC42Q96M95 316 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 WWP1Q9H0M0 922 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 NXF3Q9H4D5 531 aaKnown RBP4.23□□□□□ -1.73
FOXN3-206ENST00000554005 DCLRE1BQ9H816 532 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 MARCH7Q9H992 704 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 GPN1Q9HCN4 374 aaPredicted RBP4.23□□□□□ -1.73
FOXN3-206ENST00000554005 GLRX2Q9NS18 164 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 RGS18Q9NS28 235 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 TECRQ9NZ01 308 aaKnown RBP4.23□□□□□ -1.73
FOXN3-206ENST00000554005 IL37Q9NZH6 218 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 FETUBQ9UGM5 382 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 MUTYHQ9UIF7 546 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 VANGL2Q9ULK5 521 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 FADS3Q9Y5Q0 445 aa4.23□□□□□ -1.73
FOXN3-206ENST00000554005 TDRD15B5MCY1 1934 aaKnown RBP4.23□□□□□ -1.73
FOXN3-206ENST00000554005 PCNX3Q9H6A9 2034 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 PTPRJQ12913 1337 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 PDE4DIPQ5VU43 2346 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 IGLV4-3A0A075B6K6 122 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 A0A1B0GU03 582 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 SMIM28A0A1B0GU29 152 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 OR5H15A6NDH6 313 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 E9PQ18 207 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 GOLGA8TH3BQL2 631 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 NTN3O00634 580 aaPredicted RBP4.22□□□□□ -1.73
FOXN3-206ENST00000554005 NIPSNAP2O75323 286 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 TRIM16O95361 564 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 ASS1P00966 412 aaKnown RBP4.22□□□□□ -1.73
FOXN3-206ENST00000554005 TNNC2P02585 160 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 HEXBP07686 556 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 ABHD2P08910 425 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 ALOX5P09917 674 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 ADORA3P0DMS8 318 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 PRKACAP17612 351 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 TNNI1P19237 187 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 ZFP36L2P47974 494 aaKnown RBP4.22□□□□□ -1.73
FOXN3-206ENST00000554005 VBP1P61758 197 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 TFAMQ00059 246 aaKnown RBP4.22□□□□□ -1.73
FOXN3-206ENST00000554005 SMARCB1Q12824 385 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 RIGQ13278 110 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 EPC2Q52LR7 807 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 PPP1R2P3Q6NXS1 205 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 ERICH1Q86X53 443 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 ARHGAP18Q8N392 663 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 LRRC52Q8N7C0 313 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 RTL3Q8N8U3 475 aaKnown RBP4.22□□□□□ -1.73
FOXN3-206ENST00000554005 CCDC112Q8NEF3 446 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 OR5B17Q8NGF7 314 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 TMA16Q96EY4 203 aaKnown RBP4.22□□□□□ -1.73
FOXN3-206ENST00000554005 DTD2Q96FN9 168 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 ANKRD36BP1Q96IX9 119 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 ALKBH3Q96Q83 286 aaPredicted RBP4.22□□□□□ -1.73
FOXN3-206ENST00000554005 RAB40CQ96S21 281 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 C9orf16Q9BUW7 83 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 NUP58Q9BVL2 599 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 TMEM117Q9H0C3 514 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 TMEM245Q9H330 911 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 DPEP3Q9H4B8 488 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 LIN28AQ9H9Z2 209 aaKnown RBP4.22□□□□□ -1.73
FOXN3-206ENST00000554005 WDR41Q9HAD4 459 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 NTN4Q9HB63 628 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 NMUR1Q9HB89 426 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 DMAP1Q9NPF5 467 aaPredicted RBP4.22□□□□□ -1.73
FOXN3-206ENST00000554005 RAB20Q9NX57 234 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 NDUFA13Q9P0J0 144 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 AKAP7Q9P0M2 348 aaPredicted RBP4.22□□□□□ -1.73
FOXN3-206ENST00000554005 GCNT4Q9P109 453 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 SLC7A8Q9UHI5 535 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 TRMT6Q9UJA5 497 aaKnown RBP4.22□□□□□ -1.73
FOXN3-206ENST00000554005 UBQLN1Q9UMX0 589 aaKnown RBP4.22□□□□□ -1.73
FOXN3-206ENST00000554005 FAM32AQ9Y421 112 aaKnown RBP4.22□□□□□ -1.73
FOXN3-206ENST00000554005 HES2Q9Y543 173 aa4.22□□□□□ -1.73
FOXN3-206ENST00000554005 SH3PXD2BA1X283 911 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 ZSCAN5CA6NGD5 496 aaPredicted RBP4.21□□□□□ -1.74
FOXN3-206ENST00000554005 ARL5CA6NH57 179 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 A8MXK9 166 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 K7EQG2 157 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 TLR4O00206 839 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 ZSCAN12O43309 604 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 RIPK2O43353 540 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 SPOPO43791 374 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms