RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 COPZ1P61923 177 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 ALDH6A1Q02252 535 aaKnown RBP12.35□□□□□ -0.43
PSMC6-205ENST00000553899 FLOT2Q14254 428 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 INPP5JQ15735 1006 aaPredicted RBP12.35□□□□□ -0.43
PSMC6-205ENST00000553899 BCL2A1Q16548 175 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 PLPPR5Q32ZL2 321 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 RNFT1Q5M7Z0 435 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 WBP2NLQ6ICG8 309 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 SMYD1Q8NB12 490 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 DNAJA4Q8WW22 397 aaPredicted RBP12.35□□□□□ -0.43
PSMC6-205ENST00000553899 CLPTM1LQ96KA5 538 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 PIGQQ9BRB3 760 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 UGT2B28Q9BY64 529 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 ADAM19Q9H013 955 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 ACER3Q9NUN7 267 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 TAS2R10Q9NYW0 307 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 MED11Q9P086 117 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 GMPR2Q9P2T1 348 aaKnown RBP12.35□□□□□ -0.43
PSMC6-205ENST00000553899 FBXL2Q9UKC9 423 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 PCNX3Q9H6A9 2034 aa12.35□□□□□ -0.43
PSMC6-205ENST00000553899 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 C2orf72A6NCS6 295 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 RRP9O43818 475 aaKnown RBP12.34□□□□□ -0.43
PSMC6-205ENST00000553899 IFNW1P05000 195 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 GPIP06744 558 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 NCK1P16333 377 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 PRKCAP17252 672 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 ITGA2P17301 1181 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 GDF1P27539 372 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 MSX2P35548 267 aaPredicted RBP12.34□□□□□ -0.43
PSMC6-205ENST00000553899 MAGEA5P43359 124 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 CLK1P49759 484 aaKnown RBP12.34□□□□□ -0.43
PSMC6-205ENST00000553899 GFRA1P56159 465 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 RGS8P57771 180 aaPredicted RBP12.34□□□□□ -0.43
PSMC6-205ENST00000553899 IFI44LQ53G44 452 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 CMPK2Q5EBM0 449 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 OR5M10Q6IEU7 315 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 ARHGAP11AQ6P4F7 1023 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 AAGABQ6PD74 315 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 ZNF613Q6PF04 617 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 PIWIL3Q7Z3Z3 882 aaKnown RBP12.34□□□□□ -0.43
PSMC6-205ENST00000553899 GRINAQ7Z429 371 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 GATSQ8NAP1 163 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 FAM83FQ8NEG4 500 aaPredicted RBP12.34□□□□□ -0.43
PSMC6-205ENST00000553899 SNRNP40Q96DI7 357 aaKnown RBP12.34□□□□□ -0.43
PSMC6-205ENST00000553899 SH3YL1Q96HL8 342 aaPredicted RBP12.34□□□□□ -0.43
PSMC6-205ENST00000553899 LRGUKQ96M69 825 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 JSRP1Q96MG2 331 aaPredicted RBP12.34□□□□□ -0.43
PSMC6-205ENST00000553899 IL1RAPQ9NPH3 570 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 MED17Q9NVC6 651 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 PACSIN3Q9UKS6 424 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 SH3GLB1Q9Y371 365 aa12.34□□□□□ -0.43
PSMC6-205ENST00000553899 NCKAP5O14513 1909 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 TCRBV5S2A0A599 114 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 HTR3EA5X5Y0 456 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 TTLL8A6PVC2 850 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 AQP7O14520 342 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 OIP5O43482 229 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 BCAS1O75363 584 aaPredicted RBP12.33□□□□□ -0.44
PSMC6-205ENST00000553899 CIB2O75838 187 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 PRKD3O94806 890 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 ZNF682O95780 498 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 NUDT14O95848 222 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 OPN1SWP03999 348 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 SEMG1P04279 462 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 PNMTP11086 282 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 EDN3P14138 238 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 PSMA4P25789 261 aaKnown RBP12.33□□□□□ -0.44
PSMC6-205ENST00000553899 IFNA8P32881 189 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 QPRTQ15274 297 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.33□□□□□ -0.447e-9■■■■□ 21.1
PSMC6-205ENST00000553899 GLIPR1L2Q4G1C9 344 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 ULK3Q6PHR2 472 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 FKBP9P1Q75LS8 142 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 SPPL2CQ8IUH8 684 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 TMCO5AQ8N6Q1 288 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 OR6T1Q8NGN1 323 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 NEIL3Q8TAT5 605 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 PHF10Q8WUB8 498 aaKnown RBP12.33□□□□□ -0.44
PSMC6-205ENST00000553899 UTP4Q969X6 686 aaKnown RBP12.33□□□□□ -0.44
PSMC6-205ENST00000553899 CCDC124Q96CT7 223 aaKnown RBP12.33□□□□□ -0.44
PSMC6-205ENST00000553899 DUS3LQ96G46 650 aaKnown RBP12.33□□□□□ -0.44
PSMC6-205ENST00000553899 HSH2DQ96JZ2 352 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 C7orf34Q96L11 122 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 GPR137Q96N19 417 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 DKKL1Q9UK85 242 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 ACAD8Q9UKU7 415 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 AP4B1Q9Y6B7 739 aa12.33□□□□□ -0.44
PSMC6-205ENST00000553899 TCRBV3S1A0A5B6 114 aa12.32□□□□□ -0.44
PSMC6-205ENST00000553899 AP3D1O14617 1153 aa12.32□□□□□ -0.44
PSMC6-205ENST00000553899 ZNF208O43345 1280 aa12.32□□□□□ -0.44
PSMC6-205ENST00000553899 ADAM11O75078 769 aa12.32□□□□□ -0.44
PSMC6-205ENST00000553899 CYP7B1O75881 506 aa12.32□□□□□ -0.44
PSMC6-205ENST00000553899 GP1BBP13224 206 aa12.32□□□□□ -0.44
PSMC6-205ENST00000553899 CPN1P15169 458 aa12.32□□□□□ -0.44
PSMC6-205ENST00000553899 HK1P19367 917 aa12.32□□□□□ -0.44
PSMC6-205ENST00000553899 ATP6V1B2P21281 511 aa12.32□□□□□ -0.44
PSMC6-205ENST00000553899 MAGEA2P43356 314 aa12.32□□□□□ -0.44
PSMC6-205ENST00000553899 IDH2P48735 452 aaKnown RBP12.32□□□□□ -0.44
PSMC6-205ENST00000553899 TDGF1P3P51864 188 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms