RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 FCRLBQ6BAA4 426 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 TMEM184AQ6ZMB5 413 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 CYB561A3Q8NBI2 242 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 NAXEQ8NCW5 288 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 DOK4Q8TEW6 326 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 SPIN2AQ99865 258 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 SPIN2BQ9BPZ2 258 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 MMP28Q9H239 520 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 GABRPO00591 440 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 P2RX6O15547 441 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 GASTP01350 101 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 S100PP25815 95 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 PPA1Q15181 289 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 SLC25A44Q96H78 314 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-209ENST00000545689 ERVK-19Q9WJR5 959 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 MYH9P35579 1960 aaKnown RBP11.72□□□□□ -0.53
COL4A6-209ENST00000545689 A0A0A6YYC8 382 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-209ENST00000545689 A8MVJ9 347 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 I3L1I5 382 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-209ENST00000545689 FRS3O43559 492 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 C21orf33P30042 268 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-209ENST00000545689 GPR50Q13585 617 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 HENMT1Q5T8I9 393 aaKnown RBP11.72□□□□□ -0.53
COL4A6-209ENST00000545689 IL17RCQ8NAC3 791 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 FGF13Q92913 245 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 TCTN2Q96GX1 697 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 HHIPL1Q96JK4 782 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 GPR78Q96P69 363 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 GON7Q9BXV9 100 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 KCNIP1Q9NZI2 227 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 DNMT3BQ9UBC3 853 aaKnown RBP11.72□□□□□ -0.53
COL4A6-209ENST00000545689 CD207Q9UJ71 328 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 TRBV4-1A0A0J9YWV2 114 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 ZNF736B4DX44 427 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-209ENST00000545689 GPR39O43194 453 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 HPGDSO60760 199 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 SLC22A5O76082 557 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 IFNGR1P15260 489 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 CSNK2A1P68400 391 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-209ENST00000545689 PTPRRQ15256 657 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 EEF1A1P5Q5VTE0 462 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 SLC46A3Q7Z3Q1 461 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 SLC38A5Q8WUX1 472 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 TCEAL3Q969E4 200 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 SMIM14Q96QK8 99 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 EEF1E1-BLOC1S5C9J1V9 151 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 GABARAPO95166 117 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 IDUAP35475 653 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 POU3F4P49335 361 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 KCNJ10P78508 379 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 ADARB1P78563 741 aaKnown RBP11.72□□□□□ -0.53
COL4A6-209ENST00000545689 CTBSQ01459 385 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 ZNF322Q6U7Q0 402 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-209ENST00000545689 FUNDC1Q8IVP5 155 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 CSNK2A3Q8NEV1 391 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 C7orf34Q96L11 122 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 GGT3PA6NGU5 568 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 METTL15A6NJ78 407 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 LAMTOR5O43504 91 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 CACNG3O60359 315 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 NR4A2P43354 598 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 MTNR1BP49286 362 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 RAB5BP61020 215 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 TEKQ02763 1124 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 NXNL2Q5VZ03 156 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 OR5D14Q8NGL3 314 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 GABARAPL1Q9H0R8 117 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 ZBP1Q9H171 429 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 SAGE1Q9NXZ1 904 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 USP36Q9P275 1121 aaKnown RBP11.72□□□□□ -0.53
COL4A6-209ENST00000545689 HHLA2Q9UM44 414 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 ZNF281Q9Y2X9 895 aa11.72□□□□□ -0.53
COL4A6-209ENST00000545689 COL16A1Q07092 1604 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-209ENST00000545689 SIPA1L3O60292 1781 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-209ENST00000545689 A0A1W2PQ09 198 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 HMX2A2RU54 273 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 CA3P07451 260 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 TACR1P25103 407 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 PTBP1P26599 531 aaKnown RBP eCLIP11.71□□□□□ -0.534e-6■■■■□ 21.1
COL4A6-209ENST00000545689 XCR1P46094 333 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 TUBB3Q13509 450 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 SYT6Q5T7P8 510 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-209ENST00000545689 MISPQ8IVT2 679 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 OR51T1Q8NGJ9 327 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 TBC1D15Q8TC07 691 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 COQ10AQ96MF6 247 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 RASD1Q9Y272 281 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 SLC2A5P22732 501 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 ERVK-25P63136 954 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 GTPBP8Q8N3Z3 284 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-209ENST00000545689 OR14A16Q8NHC5 309 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 LMF1Q96S06 567 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 FTSJ1Q9UET6 329 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 J3KTA2 159 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 NARSO43776 548 aaKnown RBP11.71□□□□□ -0.53
COL4A6-209ENST00000545689 NUDT7P0C024 238 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 ARSBP15848 533 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 HOXA9P31269 272 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 ZNF169Q14929 603 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-209ENST00000545689 CNN3Q15417 329 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms