RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SLC25A35Q3KQZ1 300 aa16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 SLC25A53Q5H9E4 307 aa16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 LSRQ86X29 649 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 GRAMD2AQ8IUY3 354 aa16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 MAL2Q969L2 176 aa16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 TM9SF2Q99805 663 aa16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 ZNF629Q9UEG4 869 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 SLC35A3Q9Y2D2 325 aa16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 GPC6Q9Y625 555 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 DSPPQ9NZW4 1301 aa16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 SLC22A20A6NK97 555 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 ETV2O00321 342 aaPredicted RBP16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 DVL2O14641 736 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 HNRNPRO43390 633 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 BMP2P12643 396 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 EIF1P41567 113 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 DLX5P56178 289 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 EEFSECP57772 596 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 CBFBQ13951 182 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 PON3Q15166 354 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 CHMP1BQ7LBR1 199 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 VRK2Q86Y07 508 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 LILRA2Q8N149 483 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 FNDC9Q8TBE3 224 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 TMEM19Q96HH6 336 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 MRGPRX4Q96LA9 322 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 TREX2Q9BQ50 279 aaPredicted RBP16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 TRIM8Q9BZR9 551 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 GMEB1Q9Y692 573 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 CENPEQ02224 2701 aa16.44■□□□□ 0.22
SNRPA1-203ENST00000540017 INTS1Q8N201 2190 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 FBP2O00757 339 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 TNFSF11O14788 317 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 ADAMDEC1O15204 470 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 AQP8O94778 261 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 COX6B1P14854 86 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 ELK4P28324 431 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 ADH6P28332 368 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 RYKP34925 604 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 SFTPDP35247 375 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 EIF1AXP47813 144 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 SLC6A8P48029 635 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 CRISP3P54108 245 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 SESN3P58005 492 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 FADDQ13158 208 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 MRPL2Q5T653 305 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 MEX3BQ6ZN04 569 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 DPP10Q8N608 796 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 OR10D3Q8NH80 312 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 WDR60Q8WVS4 1066 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 PMM1Q92871 262 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 SPOCK3Q9BQ16 436 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 CPPED1Q9BRF8 314 aaPredicted RBP16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 RAD21L1Q9H4I0 556 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 A4GALTQ9NPC4 353 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 SAR1AQ9NR31 198 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 DNAJB12Q9NXW2 375 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 LEF1Q9UJU2 399 aaPredicted RBP16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 NDUFAF1Q9Y375 327 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 FBN2P35556 2912 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 DCHS2Q6V1P9 2916 aa16.43■□□□□ 0.22
SNRPA1-203ENST00000540017 AP3D1O14617 1153 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 CXCL13O43927 109 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 TNFSF13O75888 250 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 IL18BPO95998 194 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 DBIP07108 87 aaKnown RBP16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 NID1P14543 1247 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 IL7RP16871 459 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 PGCP20142 388 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 ME2P23368 584 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 RPS3AP61247 264 aaKnown RBP16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 SGCBQ16585 318 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 RUNDC3AQ59EK9 446 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 ESPNLQ6ZVH7 1005 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 P4HA3Q7Z4N8 544 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 ZNF295-AS1Q8N0V1 137 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 ATP6V1C2Q8NEY4 427 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 OR52P1PQ8NH57 321 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 OR2V1Q8NHB1 315 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 TSPEARQ8WU66 669 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 C10orf82Q8WW14 230 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 ST8SIA1Q92185 356 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 KLHL15Q96M94 604 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 ZFP3Q96NJ6 502 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 RSPO3Q9BXY4 272 aaPredicted RBP16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 EXOSC3Q9NQT5 275 aaKnown RBP16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 RLIMQ9NVW2 624 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 THUMPD1Q9NXG2 353 aaKnown RBP16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 CALML5Q9NZT1 146 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 JKAMPQ9P055 326 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 KLHL14Q9P2G3 628 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 STOML1Q9UBI4 398 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 ZNF175Q9Y473 711 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 CHST2Q9Y4C5 530 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 PKDREJQ9NTG1 2253 aa16.42■□□□□ 0.22
SNRPA1-203ENST00000540017 A0A0G2JPF8 293 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 A0A1W2PNV4 684 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms